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Protein Overview: gi|24346470, gi|...

General Information:
Name(s) found: gi|24372477 [NCBI NR]
gi|24346470 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|24372477|ref|NP_716519.1| amidase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24346470|gb|AAN53964.1|AE015534_3 amidase family protein [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 568 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: biological_process [ND]
    Molecular Function: amidase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFEVTEVSIA ELRAALESGR TTVVELVKSY LARVAAYDGP ATETKLNALV VHNPDALKEA  60
   61 EASDARRARG ETLSPLDGIP YTAKDSYLVK GLTAASGSPA FKDLVAQYDA FAVERLRAAG 120
  121 AICLGKTNMP PMANGGMQRG HYGRAESPYN AEYLTAPFAS GSSNGAGTGT AASYSAFGLA 180
  181 EETWSSGRGP ASNNGLCAYT PSRGVISVRG NWPLTPTMDV VVPYTRTMAD MLEVLDVIVA 240
  241 DDPITRGDLW RLQPWVQIPK ASTVRPESYL ALAASADTLK GKRFGVPRMY INKDELAGTS 300
  301 ENPGIGGPTG QRIHTRQSVI DLWEAARKAL EAAGAEVIEV DFPLVSNCEG DRPGAPTVFN 360
  361 RGIVTPQFLH DELWELSGWA FDEFLRANND PKLNKLEDVV GHLIFPHDLC TLPNREGDLA 420
  421 AGMEEYVNMA KRGLKSFDQI DSIPDGLRGL EKTRKLDLED WMDGLKLDAV LFPTVADVGP 480
  481 ADAHVNPASA DIAWSNGVWV ANGNLAIRHL GVPTVTVPMG VMADIGMPVG LTFAGRAYDD 540
  541 NNLLKFAGAF ESTGNRRIIP PRTPKLGQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..568] PSI-BLAST 122.0 No description for 2df4A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
    		•  7.42914157198604 bayes_pls_golite062009
  • ligase activity
    		•  3.24097391466055 bayes_pls_golite062009
  • catalytic activity
    		•  0.906509857495572 bayes_pls_golite062009
  • binding
    		•  0.644139061567672 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
    		•  0.301483171038292 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle