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Protein Overview: gi|24346112, gi|...

General Information:
Name(s) found: gi|24372200 [NCBI NR]
gi|24346112 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • gi|24372200|ref|NP_716242.1| ubiquinol-cytochrome c reductase, cytochrome b [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24346112|gb|AAN53687.1|AE015508_3 ubiquinol-cytochrome c reductase, cytochrome b [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 404 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: ubiquinol-cytochrome-c reductase activity [ISSLink to PubMed article]
    electron carrier activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKNLINWID ARIPMTATYN RHVGQYATPT NFNFWYFFGS LAMLVLVNQL LTGIWLTMNY  60
   61 VPTAEGAFAS VEYIMRDVEY GWLLRYMHST GASAFFVVIY LHMFRGLIYG SYQKPRELLW 120
  121 LFGMLIFLVL MAEAFMGYLL PWGQMSYWGA QVIISLFGAI PVIGDDLTLW IRGDYVISGA 180
  181 TLNRFFALHV IALPLVLVVL VFLHLIALHE VGSNNPDGIE IKKNKDENGW PVDGIPFHPY 240
  241 YTVKDIMGVA GFLIVFCYVL FFIPEGGGYF LEKPNFEAAN PMKTPEHIAP VWYFTPFYAI 300
  301 LRAVPDKLGG VIMMGLSIGV LFVLPWLDRC KVKSVRYRST LHKLNIAQFA VSFIVLGYLG 360
  361 VVPASPTLTI VAQVFTFTYF GFFVALWVYS KNEKTKPVPA RLTH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..404] PSI-BLAST 159.0 Mitochondrial cytochrome b subunit, C-terminal domain; Mitochondrial cytochrome b subunit, N-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor
    		•  12.6027406026517 bayes_pls_golite062009
  • ubiquinol-cytochrome-c reductase activity
    		•  12.6027406026517 bayes_pls_golite062009
  • oxidoreductase activity, acting on diphenols and related substances as donors
    		•  9.20388916419937 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
    		•  7.91754205622571 bayes_pls_golite062009
  • oxidoreductase activity
    		•  6.47658304679899 bayes_pls_golite062009
  • electron transporter, transferring electrons within CoQH2-cytochrome c reductase complex activity
    		•  6.28608054530718 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  6.2092870783393 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  5.7873765619132 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  5.68072183887254 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  5.3015608578326 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  5.25342386319285 bayes_pls_golite062009
  • NADH dehydrogenase activity
    		•  4.56441771839315 bayes_pls_golite062009
  • electron carrier activity
    		•  4.44921672214173 bayes_pls_golite062009
  • formate dehydrogenase activity
    		•  3.83149707063563 bayes_pls_golite062009
  • transporter activity
    		•  3.45764306673522 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.38637995472629 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.37175230596465 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH
    		•  2.22476140193744 bayes_pls_golite062009
  • catalytic activity
    		•  1.19342057724506 bayes_pls_golite062009
  • oxidoreductase activity, acting on the aldehyde or oxo group of donors
    		•  1.03512868485178 bayes_pls_golite062009
  • binding
    		•  0.774901332897627 bayes_pls_golite062009
  • protein binding
    		•  0.404482007264961 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.158842209858127 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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    Created and Maintained by: Michael Riffle