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Protein Overview: gi|24345852, gi|...

General Information:
Name(s) found: gi|24371994 [NCBI NR]
gi|24345852 [NCBI NR]
Description(s) found:
Found 5 descriptions.
SHOW ALL
  • gi|24371994|ref|NP_716036.1| fumarate reductase flavoprotein subunit [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24345852|gb|AAN53481.1|AE015488_3 fumarate reductase flavoprotein subunit [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 668 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: anaerobic respiration [ISSLink to PubMed article]
    tricarboxylic acid cycle [ISSLink to PubMed article]
    Molecular Function: succinate dehydrogenase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLIYTDSLV VGAGLAGLRV AIASKERGLD TLVLSLIPAK RSHSAAAQGG MQASLGNAVK  60
   61 GMGDDEDVHF QDTVKGSDWG CDQEVARMFA HCAPKAVREL ANWGVPWSRV SAGPREVIVN 120
  121 AQKVTLQEAE EAHGLINARD FGGTKKWRTC YTADGTGHSL LYAMDNKAIS MDIPVHERVE 180
  181 ALALIHDGER CHGVVARCLI SGELRAYVAK STTIATGGYG RIYEVSTNAI ICEGIGQALA 240
  241 LETGVATLGN MEAVQFHPTA IVPVGILTTE GCRGDGGLLR DKDGYRFMPD YEPEKKELAS 300
  301 RDVVSRRMTE HMRKGKGVDS PYGPHLWLDI TLLGRKHIET NLREVQEICE NFLGIDPAKD 360
  361 WIPVRPTQHY SMGGIRTKAT GESPQLKGLF SVGEAACWDM HGFNRLGGNS LAETVVGGMI 420
  421 IGKYIADFCE NNSLEINTTL AEQFMRQVQT EIDTLVDGDG HESPFELKHA MQRIMMDYVG 480
  481 IFRNGPELDK AVTELKALLE RSRKLGIKCK KRHANPELVE ALRVKRMLKV ALTVACGAAA 540
  541 RTESRGAHAR EDYPQRNDRD WLNRTLASWP DANALEPVLS YEPLDVMKME LPPGYRGYGI 600
  601 DNAIAHPDTA KREQQIAQIL AELGEDADRY QRQAALMPFE LPPSLQANNE RLSDTLQKPS 660
  661 ANALGEKS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..668] PSI-BLAST 157.0 Fumarate reductase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • succinate dehydrogenase (ubiquinone) activity
    		•  8.87698547678677 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor
    		•  8.87698547678677 bayes_pls_golite062009
  • L-aspartate oxidase activity
    		•  7.97437641217089 bayes_pls_golite062009
  • aspartate oxidase activity
    		•  7.32727957948448 bayes_pls_golite062009
  • oxidoreductase activity
    		•  6.04709872216269 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH
    		•  5.74880353813045 bayes_pls_golite062009
  • succinate dehydrogenase activity
    		•  4.75922280235383 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-CH group of donors
    		•  4.30055937900308 bayes_pls_golite062009
  • NADPH-adrenodoxin reductase activity
    		•  3.86336671540719 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
    		•  2.57282017498189 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
    		•  2.52207884417451 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  2.50603438449246 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  2.28982462439281 bayes_pls_golite062009
  • oxidoreductase activity, acting on sulfur group of donors, NAD or NADP as acceptor
    		•  2.26549080531565 bayes_pls_golite062009
  • oxygen-dependent protoporphyrinogen oxidase activity
    		•  2.16428165652808 bayes_pls_golite062009
  • dihydrolipoyl dehydrogenase activity
    		•  1.91979117253135 bayes_pls_golite062009
  • catalytic activity
    		•  1.56773888754354 bayes_pls_golite062009
  • oxidoreductase activity, acting on sulfur group of donors
    		•  1.18990628739838 bayes_pls_golite062009
  • antioxidant activity
    		•  1.12347155061135 bayes_pls_golite062009
  • transporter activity
    		•  0.890824576391732 bayes_pls_golite062009
  • binding
    		•  0.845557020684164 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.706117386114413 bayes_pls_golite062009
  • ferredoxin reductase activity
    		•  0.61713057030514 bayes_pls_golite062009
  • oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor
    		•  0.61713057030514 bayes_pls_golite062009
  • ferredoxin-NADP+ reductase activity
    		•  0.61713057030514 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.491481205015383 bayes_pls_golite062009
  • succinate-CoA ligase activity
    		•  0.468246082354334 bayes_pls_golite062009
  • coenzyme binding
    		•  0.424849261981 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.26114823844682 bayes_pls_golite062009
  • electron carrier activity
    		•  0.162567940185023 bayes_pls_golite062009
  • protein binding
    		•  0.139858531143419 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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