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Protein Overview: gi|24345742, gi|...

General Information:
Name(s) found: gi|24371910 [NCBI NR]
gi|24345742 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24371910|ref|NP_715952.1| outer membrane porin, putative [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24345742|gb|AAN53397.1|AE015479_4 outer membrane porin, putative [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 384 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: transport [ISSLink to PubMed article]
    Molecular Function: porin activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKTCIALML PMLLVAINSQ AIELYNDQKN SLDLSGWLGF AALNDSHDTS VIDDSSRVRF  60
   61 SFERSERNGW TAFATTEWGI NMVSSDDSLV MQGGKLAAEK TEDFLYNRLG YVGMSHDKWG 120
  121 SLSFGKQWGA YYDVAGTTDL PNVFAGYSVG AYAFSDGGLT GTGRADSAFI YRNNFGPVQI 180
  181 ALQYAAKTNG DVTLKNDDGS EMVNSKLNFD SSYGASLTYS LTDKFKLLAG VNRGDFEGHL 240
  241 GNTQVDETNE IVGIGAMYGD YYHYADNREA SGLYVGFNAH KSKNNELVGG DLYDATGAEL 300
  301 MTAYQFDNGF VPMIVLSYLD LDTDANTPIQ GKWTRQFAML GLHYRYSNDT VMFAEMKLNF 360
  361 SNMDDAALEA QEDNGFAVGI NYFF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..384] PSI-BLAST 42.0 CRYSTAL STRUCTURES EXPLAIN FUNCTIONAL PROPERTIES OF TWO E. COLI PORINS

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transporter activity
    		•  2.60507547654721 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.86109425700917 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.424956094980482 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle