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Protein Overview: OTC_SHEON

General Information:
Name(s) found: OTC_SHEON [Swiss-Prot]
Description(s) found:
Found 5 descriptions.
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  • Ornithine carbamoyltransferase OS=Shewanella oneidensis (strain MR-1) GN=argF PE=3 SV=1 [Swiss-Prot]
    • Organism: Shewanella oneidensis MR-1
    Length: 301 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: arginine biosynthetic process [ISSLink to PubMed article]
    Molecular Function: ornithine carbamoyltransferase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKHFLSIKEL TQQQLLDLIT LAKTIKANPA EYRHALDGKS VVMLFEKPSL RTRVSFDIGI  60
   61 NKFGGHCLYL DQQNGALGKR ESVADFASNL SCWADAIVAR TYSHTTIEQL AEFGTVPVIN 120
  121 ALSDLYHPCQ ALADFLTLAE HFENISDVKL AYVGDGNNVT NSLMYCAAIL GATMTVICPA 180
  181 GHFPDGYVVA EVQELASRYG GKIVLTSDID AIEGHDAIYT DTWISMGDPT PLAEIKDKFA 240
  241 PYQVNNALMA KAGAHFFMHC LPAHRGVEVT DAVMDGECSL ILQQAENRMH AQNAVLVTLF 300
  301 S

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..301] PSI-BLAST 119.0 ORNITHINE CARBAMOYLTRANSFERASE FROM PYROCOCCUS FURIOSUS

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ornithine carbamoyltransferase activity
    		•  6.04385935444669 bayes_pls_golite062009
  • carboxyl- or carbamoyltransferase activity
    		•  5.32518877756022 bayes_pls_golite062009
  • aspartate carbamoyltransferase activity
    		•  3.84118892938517 bayes_pls_golite062009
  • transferase activity
    		•  2.2887439598954 bayes_pls_golite062009
  • catalytic activity
    		•  2.06069688716378 bayes_pls_golite062009
  • carbamoyl-phosphate synthase activity
    		•  1.85495044989817 bayes_pls_golite062009
  • carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
    		•  1.84607164910918 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  1.54712264845123 bayes_pls_golite062009
  • dihydroorotase activity
    		•  0.585784960037124 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle