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Protein Overview: CAPP_SHEON

General Information:
Name(s) found: CAPP_SHEON [Swiss-Prot]
Description(s) found:
Found 5 descriptions.
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  • Phosphoenolpyruvate carboxylase OS=Shewanella oneidensis (strain MR-1) GN=ppc PE=3 SV=1 [Swiss-Prot]
    • Organism: Shewanella oneidensis MR-1
    Length: 881 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: tricarboxylic acid cycle [ISSLink to PubMed article]
    Molecular Function: phosphoenolpyruvate carboxylase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDMYASLRS NVSMLGQILG DTMRTHLGDS FLEKVEQIRK LAKDSRRGDE AAREQMLELL  60
   61 TALPDEELVP FAKAFNQFLN LANLSEQFHT ISRNCDELVC VPDPVEQLLG RMLNGRVDQT 120
  121 KMLDCLKTLD IDLVLTAHPT EISRRTLIQK YAAIVDCLAE QENNQLSDRE RQQINLRLRQ 180
  181 LIAQIWHTNE IRRERPTPVD EARWGLSTIE ESLWHAVPDF LRQLNDQVQE RTGQQLPIDI 240
  241 APVRFSSWMG GDRDGNPFVT AKVTQEVLDR NRHAAARLFL KDIVLLVGEL SMEEANDELK 300
  301 AYTNNSCEPY RFVLRSLRQK LRDTIDYLNA RIEGHNPEVD KSTLIWQESD LKAPLEMLYK 360
  361 SLYDCGMRLI ANGLLLDILR RLACFGIHML RLDIRQDAGR HCDVLAELTR YLGMGDFNHW 420
  421 DETEKQAFLL RELSNRRPLI PSNWQPSADV AEVLNTCRLI AKHPAKALGS YVISMASKPS 480
  481 DVLTVLLLLK ETGCTHPMRV VPLFETLSDL NNAAACITDL LDIDWYRGYT KGMQEVMIGY 540
  541 SDSAKDAGVM AAAWAQYRAQ EQLVAVCNQA GVKLTLFHGR GGSIGRGGGP AHKAILSQPP 600
  601 GSVDGRIRVT EQGEMIRFKF GLPKLAVQSL ALYTSAVLEA TLLPPPEPKQ EWRNCMERIA 660
  661 EESVSAYRGI VREEPDFVAY FRAATPEVEL GKLPLGSRPA KRRVDGGIES LRAIPWIFAW 720
  721 SQNRLMLPAW LGAGEALQAA CQRGEIGLLQ DMEREWPFFS TRISMLEMVY AKAEPNLARY 780
  781 YETCLVSTNL HHLGETLRQR LDLGIKVVLE LTKSDTLMAH TPWNRESVKL RNPYIDPLNF 840
  841 LQTELLARTR KETSETPASE HVQLALMLTI AGVAAGMRNT G

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..881] PSI-BLAST 1000.0 Phosphoenolpyruvate carboxylase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  2.96882793316847 bayes_pls_golite062009
  • 3-methyl-2-oxobutanoate hydroxymethyltransferase activity
    		•  1.14607009350249 bayes_pls_golite062009
  • isocitrate lyase activity
    		•  0.788938993856531 bayes_pls_golite062009
  • lyase activity
    		•  0.70986506551964 bayes_pls_golite062009
  • transferase activity
    		•  0.5687068385416 bayes_pls_golite062009
  • oxo-acid-lyase activity
    		•  0.404868472347919 bayes_pls_golite062009
  • carbon-carbon lyase activity
    		•  0.36217387205482 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.83

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle