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Protein Overview: gi|24114769, gi|...

General Information:
Name(s) found: gi|24114769 [NCBI NR]
gi|24053991 [NCBI NR]
Description(s) found:
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  • ref|NP_709279.1| hypothetical protein SF3530 [Shigella flexneri 2a str. 301] [NCBI NR]
  • gb|AAN44986.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] [NCBI NR]
  • hypothetical protein SF3530 [Shigella flexneri 2a str. 301]gi|24053991|gb|AAN44986.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] [nrdb_11152004_Chlamydomonas]
    • Organism: Shigella flexneri 2a str. 301
    Length: 297 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCAPNTGQFL LTGTPLPMLS YRHSFHAGNH ADVLKHTVQS LIIESLKEKD KPFLYLDTHA  60
   61 GAGRYQLGSE HAERTGEYLE GIARIWQQDD LPAELEAYIN VVKHFNRSGQ LRYYPGSPLI 120
  121 ARQLLREQDS LQLTELHPSD YPLLRSGFQK DSRARVEKAD GFQQLKAKLP PVSRRGLILI 180
  181 DPPYEMKTDY QAVVSGIAEG YKRFATGTYA LWYPVVLRQQ IKRMIHDLEA TGIRKILQIE 240
  241 LAVLPDSDRR GMTASGMIVI NPPWKLEQQM NNVLSWLHSK LVPAGTGHAT VSWIVPE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..297] PSI-BLAST 88.69897 No description for 2oo3A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.25333584501255 bayes_pls_golite062009
  • transferase activity
    		•  0.999964866871553 bayes_pls_golite062009
  • methyltransferase activity
    		•  0.558878917426836 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  0.557560946446304 bayes_pls_golite062009
  • S-adenosylmethionine-dependent methyltransferase activity
    		•  0.0605581837493382 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle