Protein Overview: YM30_YEAST

General Information:
Name(s) found:	YM30_YEAST [Swiss-Prot]
Description(s) found:	Uncharacterized membrane protein YMR155W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YMR155W PE=1 SV=1 [Swiss-Prot]
Organism:	Saccharomyces cerevisiae S288c
Length:	547 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKKHQNSKM GNTNHFGHLK SFVGGNVVAL GAGTPYLFSF YAPQLLSKCH IPVSASSKLS  60
   61 FSLTIGSSLM GILAGIVVDR SPKLSCLIGS MCVFIAYLIL NLCYKHEWSS TFLISLSLVL 120
  121 IGYGSVSGFY ASVKCANTNF PQHRGTAGAF PVSLYGLSGM VFSYLCSKLF GENIEHVFIF 180
  181 LMVACGCMIL VGYFSLDIFS NAEGDDASIK EWELQKSRET DDNIVPLYEN SNDYIGSPVR 240
  241 SSSPATYETY ALSDNFQETS EFFALEDRQL SNRPLLSPSS PHTKYDFEDE NTSKNTVGEN 300
  301 SAQKSMRLHV FQSLKSSTFI GYYIVLGILQ GVGLMYIYSV GFMVQAQVST PPLNQLPINA 360
  361 EKIQSLQVTL LSLLSFCGRL SSGPISDFLV KKFKAQRLWN IVIASLLVFL ASNKISHDFS 420
  421 SIEDPSLRAS KSFKNISVCS AIFGYSFGVL FGTFPSIVAD RFGTNGYSTL WGVLTTGGVF 480
  481 SVSVFTDILG RDFKANTGDD DGNCKKGVLC YSYTFMVTKY CAAFNLLFVL GIIGYTYYRR 540
  541 RATANSL

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..271]	PSI-BLAST	3.522879	No description for 1lviA_ was found.
2	View Details	[272..335]	deduced	N/A	No confident structure predictions are available.
3	View Details	[336..547]	MSA	5.879996	View MSA. No confident structure predictions are available.

Functions predicted (by domain):

#

Gene Ontology predictions

1

Term	Confidence	Notes
transporter activity	4.09176719149278	bayes_pls_golite062009
transmembrane transporter activity	3.5865018981083	bayes_pls_golite062009
substrate-specific transporter activity	3.3426261924492	bayes_pls_golite062009
substrate-specific transmembrane transporter activity	3.29689809004391	bayes_pls_golite062009
organic acid transmembrane transporter activity	2.15783210522667	bayes_pls_golite062009
ion transmembrane transporter activity	1.94035843948137	bayes_pls_golite062009
active transmembrane transporter activity	1.59419818573076	bayes_pls_golite062009
cation transmembrane transporter activity	1.5181741634556	bayes_pls_golite062009
secondary active transmembrane transporter activity	1.22264637452409	bayes_pls_golite062009
binding	1.01584233411372	bayes_pls_golite062009
polyol transmembrane transporter activity	0.924836669821548	bayes_pls_golite062009
alcohol transmembrane transporter activity	0.924836669821548	bayes_pls_golite062009
glycerol transmembrane transporter activity	0.812001619402678	bayes_pls_golite062009
symporter activity	0.74591237387473	bayes_pls_golite062009
solute:cation symporter activity	0.74591237387473	bayes_pls_golite062009
cation:sugar symporter activity	0.143419068761182	bayes_pls_golite062009
sugar:hydrogen symporter activity	0.143419068761182	bayes_pls_golite062009

2

No functions predicted.

3

No functions predicted.

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

[View Details]

Source: Reynolds et al. 2008. Manuscript submitted

Philius confidence legend

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle