General Information: |
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Name(s) found: |
VPS54_YEAST
[Swiss-Prot]
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Description(s) found: |
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Organism: | Saccharomyces cerevisiae S288c |
Length: | 889 amino acids |
Gene Ontology: |
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Cellular Component: | NONE FOUND |
Biological Process: | NONE FOUND |
Molecular Function: | NONE FOUND |
Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MSISETPHNK SQGLQKAAGR PKIVVPEGSP SRNSDSGSFT IEGDTSLNDD LLSISGSVTP 60 61 RARRSSRLSL DSITPRRSFD SRTLSVANSR SFGFENETHS GSMDFSPLGN NSIYEIVMNT 120 121 RRKNWLNYPT VADIPQVSLS KNDLDDHWKT HVIEYVKNIK SDYQIFQSTN NIRNMNQMEQ 180 181 LKELREGENM HEESFEANLR QGDAELINSI PDFYFSDKFQ LDNPRTFHKV LDAIDLFLTK 240 241 LDMKRQAERD EAFSELRDRL NDFLDIVETL LVTEISKSSH KFFHALSEVD NIQKRALDTM 300 301 SELKELAQNI KTIDAENIRK KISHLEMIFK RKNVEKLEQG LLQAKLVLNK TDECKSMYEE 360 361 NKLDNCLELI KSIDYLIKGD DSINEDVQSW TRCWPYKLSN LRTIPALSAT REFLTNMKIE 420 421 IGGKFSLQLS ILLIDDLRSF CKSIKPKETL HRIQTGSNDK KQTIFTDNFS SKITELIVRL 480 481 NRCEELTSAF DLYREKSITE LKSIIKIYLP TENAHADNNH DEKHLNNGST SGSKLSRLIK 540 541 EQTPAEFQSM LVNIFTHALE ALRRLYGHQK LLLDISLNEL ASVKSPNENQ HNMITQLDIR 600 601 TGINEIIRII QLRTGKIIAV RRELNLSLRY DYFLKFYAIC VIFIQECEVL SGEFLTKYLS 660 661 NVLASQIKHY ANAQSSKNYR NIKKKIDAEE WIPYIVDSSI QSDVNDIVSS IDIDPLSWTT 720 721 ILDMVGGSHD CENGRSEDKE KDEGNETYQG HRKSVVVGDK TFVASSSLLA TIEVIKELMV 780 781 LSINLPSIYL SNFEKLCYDA LQYYNSSAMA SVTQPGNSLL KTGRNLSIMG ESLDCLAEFV 840 841 IIVQRFYQRL SNSNRDFEPF DASHYTTLLG QFQASSNKIY MANAPPPPV |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
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Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..41] [98..245] |
7.08 | Botulinum neurotoxin | |
2 | View Details | [42..97] | 7.08 | Botulinum neurotoxin | |
3 | View Details | [246..417] | 8.47 | alpha-actinin | |
4 | View Details | [418..556] | 8.47 | alpha-actinin | |
5 | View Details | [557..693] | 8.47 | alpha-actinin | |
6 | View Details | [694..889] | 1.008939 | View MSA. Confident ab initio structure predictions are available. |
Functions predicted (by domain):
# | Gene Ontology predictions | |||||||||||||||||||||||||||||||||
1 | No functions predicted. | |||||||||||||||||||||||||||||||||
2 |
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3 | No functions predicted. | |||||||||||||||||||||||||||||||||
4 | No functions predicted. | |||||||||||||||||||||||||||||||||
5 | No functions predicted. | |||||||||||||||||||||||||||||||||
6 | No functions predicted. |
Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)