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Protein Overview: URN1_YEAST

General Information:
Name(s) found: URN1_YEAST [Swiss-Prot]
Description(s) found:
  • Pre-mRNA-splicing factor URN1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=URN1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Saccharomyces cerevisiae S288c
    Length: 465 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGEWQEFKT PAGKKYYYNK NTKQSRWEKP NLKKGSNLES NAKESQTERK PTFSLELVNG  60
   61 WHLIIYNDGT KLYFNDDSKE FKNDISQEDD SRCRSLIESL DKEKLVLLIG VARGYTMREE 120
  121 DIDKILESCN EEIHLFKRNQ DEVERKDEIS EEAGDVKSPL QESHTGLVSG YGSSSGEEDE 180
  181 EEDEEEDEEN EEQIVNQDIS IIDDLNRIDT DDIDERNIFF ELFDRYKLDK FSTWSLQSKK 240
  241 IENDPDFYKI RDDTVRESLF EEWCGERSGN ATAEESDSED NSEDDSEVLE PTKYHYLAQI 300
  301 VANAGTIAPD TIPQDIRKQQ KALYKAYKIK EYIPSKRDQD KFVSQLLFYY KTFDLEQRKE 360
  361 IFCDCLRDHE RDFTGAVESL RQDKELIDRW QTLLKAPADS SSIEDILLSI EHRCCVSPIV 420
  421 VTEPRYYVVG ILEKTVVWVR WLAAEVGPSS RFTPVGAGNE PINPE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..96] PSI-BLAST 37.228787 Splicing factor prp40
    2 View Details [97..174] deduced N/A No confident structure predictions are available.
    3 View Details [175..312] PSI-BLAST 11.221849 Hypa/FBP11
    4 View Details [313..465] deduced N/A No confident structure predictions are available.
    5 View Details [343..465] PSI-BLAST 11.0 No description for 2doeA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.24368858184725 bayes_pls_golite062009
  • protein binding
    		•  0.261137474693717 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle