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Protein Overview: PMD1_YEAST

General Information:
Name(s) found: PMD1_YEAST [Swiss-Prot]
Description(s) found:
  • Negative regulator of sporulation PMD1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PMD1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Saccharomyces cerevisiae S288c
    Length: 1753 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVLQPPSSV CYPLNLPIVP NPNLDEATRK KLTLECRTGA AVELARSGVF VHGGLTLPLN  60
   61 LTIINSLQLQ KELILYFGKQ KDRNADFKTL ADWISPEIFF LDLISRTWQR INTTIDTTSE 120
  121 NELNNGLSFK ERLFHSMCFT ESNIYIFGGL MVSPHNGYEL IATNELWKLD LKTKCWSLIS 180
  181 ENPQITRRFN HSMHVLNENN ENQDTKLIIV GGLDNMDIPV KKIDIFNLRT SLWESESKSD 240
  241 ENPASKGSSK ILVNIDGMPI SLSHDSNFSV LIENNQAEIP TLALYYPQRE ANTSRRGTDD 300
  301 GSFSTYAHDL DDKSKLPKHH HHHHGDLKYF ESDDADENAV KTLMSPIVIL PLLGNSQGAR 360
  361 MTSNPTQNNK ENSILQVPFH LQYPSGNYFN YNIVVIGFYP DPQPSNLHCF IYNIASGKWI 420
  421 RVNIACTECS ISMHRFWKLL IWKSHHQALL LGTRTDDFCS PSVQKFDHIL SFSLPMLNGY 480
  481 NKLVNTKHTR TNNGIANSHN LNVNLSLYDH LPYSNSSTIE HTNPYTVTQG YSLDDSGIPR 540
  541 LTSTATSQFE NYSRYITVPL EMESTSSIFP PYAMVLGKDA LEIFGKTLSD FEFITADGDS 600
  601 IGVPVYLLRK RWGRYFDSLL SNGYANTSFN YEFNGDTSNI ISFSPHTASK TTKFGNSSQS 660
  661 SNGSLEKYFS KNGNSKSNSN TSLKKPHSVD FTSSTSSPKQ RAISHNKLSP SEPILCADEE 720
  721 DSRSNTLKQH ATGDTGLKET GTSNKRPIST TCSSTGMVFR VPFQDMKNSK LGLSEQSGRS 780
  781 TRASSVSPPP VYKKSTNDGN DSNCTLSNTP LVYRRASTVG TTTNSSVDDG FSSIRRASHP 840
  841 LQSYIIAKSS PSSISKASPA EKAFSRRKSS ALRFIASPNQ SRQTSFASTA STASVVSSTS 900
  901 GRRRNSNQIS HLGSSASLPN SPILPVLNIP LPPQEKIPLE PLPPVPKAPS RRSSSLAEYV 960
  961 QFGRDSPVAS RRSSHSTRKS SSSDARRISN SSLLRNTLDS QLLSNSYGSD IPYEASIQEY1020
 1021 GMNNGRDEEE DGDNQDYGCI SPSNIRPIFS TINAININGN FKEGEFFSSK SYINNEKSRR1080
 1081 LSYISNPESV ESTNSNNNAI IELEPLLTPR SLYMPWSTAS VRAFAEFFYT AQINGKWLLA1140
 1141 PVTLDLLIMA KIYEIPILYE LITEVLYKII SKKEEGLSVT CEALLNLFQQ KVSRYCNENE1200
 1201 GKIRKQLDSS ESYQDTLEIK RSLANIDNGY VDSYLLRNTS MAQSIHYTDD SNGETEIDMH1260
 1261 HTGISSIGSL ANRAVPTVFA GGPRDSHNSI GSIAFPSNSG VQNIRRSVSL FSPATKKKSS1320
 1321 LSRETDPLDT SDQFTDDVPD SGPVSRQQNF PRRSSSFTET VPTEPTRYNY QNLDSSKSNR1380
 1381 ASDDKEEQNE QATLQDISNF DKYKVETLQK RNSNDGKDLD RTNDPLKNRG TEIPQNSSNL1440
 1441 ETDPFIRDSF DSDSGSSFRS DSDDLDSQLG ILPFTKMNKK LQEQTSQEFD DSIDPLYKIG1500
 1501 SSTPGSSRLH GSFSKYIRPN SQREDGSEYV NISSLENMVS PNALPPVDYV MKSIYRTSVL1560
 1561 VNDSNLMTRT KEAIELSKVL KKLKKKVLQD ISQMDDEMRE TGKPIFARGS SSPTLSRQHS1620
 1621 DVATPLKQQE NTRPALKFAS SSPISEGFRK SSIKFSQAPS TQISPRTSVT DFTASQQRRQ1680
 1681 HMNKRFSTQT THSTSALFMN PAFMPSAVNT GRKESEGHCE DRSATANRTN RKEDATTNDN1740
 1741 DNIAPFPFFG KRR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..129] deduced N/A Confident ab initio structure predictions are available.
    2 View Details [130..237] Pfam 5.356547 Kelch motif No confident structure predictions are available.
    3 View Details [238..1753] deduced N/A No confident structure predictions are available.
    4 View Details [727..945] deduced N/A No confident structure predictions are available.
    5 View Details [946..1095] deduced N/A No confident structure predictions are available.
    6 View Details [1096..1299] deduced N/A No confident structure predictions are available.
    7 View Details [1300..1433] deduced N/A No confident structure predictions are available.
    8 View Details [1434..1666] deduced N/A No confident structure predictions are available.
    9 View Details [1667..1753] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.86

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle