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Protein Overview: NSP1_YEAST

General Information:
Name(s) found: NSP1_YEAST [Swiss-Prot]
Description(s) found:
  • Nucleoporin NSP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NSP1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Saccharomyces cerevisiae S288c
    Length: 823 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFNTPQQNK TPFSFGTANN NSNTTNQNSS TGAGAFGTGQ STFGFNNSAP NNTNNANSSI  60
   61 TPAFGSNNTG NTAFGNSNPT SNVFGSNNST TNTFGSNSAG TSLFGSSSAQ QTKSNGTAGG 120
  121 NTFGSSSLFN NSTNSNTTKP AFGGLNFGGG NNTTPSSTGN ANTSNNLFGA TANANKPAFS 180
  181 FGATTNDDKK TEPDKPAFSF NSSVGNKTDA QAPTTGFSFG SQLGGNKTVN EAAKPSLSFG 240
  241 SGSAGANPAG ASQPEPTTNE PAKPALSFGT ATSDNKTTNT TPSFSFGAKS DENKAGATSK 300
  301 PAFSFGAKPE EKKDDNSSKP AFSFGAKSNE DKQDGTAKPA FSFGAKPAEK NNNETSKPAF 360
  361 SFGAKSDEKK DGDASKPAFS FGAKPDENKA SATSKPAFSF GAKPEEKKDD NSSKPAFSFG 420
  421 AKSNEDKQDG TAKPAFSFGA KPAEKNNNET SKPAFSFGAK SDEKKDGDAS KPAFSFGAKS 480
  481 DEKKDSDSSK PAFSFGTKSN EKKDSGSSKP AFSFGAKPDE KKNDEVSKPA FSFGAKANEK 540
  541 KESDESKSAF SFGSKPTGKE EGDGAKAAIS FGAKPEEQKS SDTSKPAFTF GAQKDNEKKT 600
  601 EESSTGKSTA DVKSSDSLKL NSKPVELKPV SLDNKTLDDL VTKWTNQLTE SASHFEQYTK 660
  661 KINSWDQVLV KGGEQISQLY SDAVMAEHSQ NKIDQSLQYI ERQQDELENF LDNFETKTEA 720
  721 LLSDVVSTSS GAAANNNDQK RQQAYKTAQT LDENLNSLSS NLSSLIVEIN NVSNTFNKTT 780
  781 NIDINNEDEN IQLIKILNSH FDALRSLDDN STSLEKQINS IKK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..68] ORFEUS 14.54 Fibrinogen
    2 View Details [69..361] ORFEUS 13.46 Hybrid domain of integrin beta; Integrin beta A domain; Integrin beta tail domain; Integrin beta EGF-like domains
    3 View Details [362..525] ORFEUS 13.46 Hybrid domain of integrin beta; Integrin beta A domain; Integrin beta tail domain; Integrin beta EGF-like domains
    4 View Details [526..628] ORFEUS 13.46 Hybrid domain of integrin beta; Integrin beta A domain; Integrin beta tail domain; Integrin beta EGF-like domains
    5 View Details [629..823] MSA 13.060996 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle