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Protein Overview: MED5_YEAST

General Information:
Name(s) found: MED5_YEAST [Swiss-Prot]
Description(s) found:
  • Mediator of RNA polymerase II transcription subunit 5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NUT1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Saccharomyces cerevisiae S288c
    Length: 1132 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKESVYNLA LKCAERQLTS MEFSNLYKEF FNEKFPSLIQ EEEEDTTTTA NINEVKKASD  60
   61 LVDTPSNNTA ATADTTHLHE ALDIVCSDFV KILNLEKPLI LADYIVEVLL VNYNSDMIKC 120
  121 FLPKLNSVRN SLLLAHFFSK SCSFFAKLSD TLIIDQVRKD LGNVIVPNIL SLDMNSMNKE 180
  181 LIAIVSKLLQ TTLKLSPSPI LLTSAGCKNG SFTLLNQLSQ TNKLLFKRVS QTFEAKLHFK 240
  241 DTKPFLNKDS TNEFVGSPSL TSPQYIPSPL SSTKPPGSVN SAAKYKDMKL LRYYKNIWLN 300
  301 NKIINWEISN PDFLSKYSAI TSSIFQESFN SVQNLDQLLT DLIETSFTCF AQFVSNKQYH 360
  361 QANSNLTLLE RKWVIFITKH LPLLILENSS RSPRVVTNAL DNIDEKVVKA IRIYFTEKDD 420
  421 NKTNNEDLFD DYPSTSLDIR HDFIKGLIML NLQPASVINN YLREDQMIDT SILPTRDDLF 480
  481 VRNLQGIQEV VHNTNSFIIS SLDTLELESI TESITHDSSN GLFQVLHNFE SVAPTKQREI 540
  541 VKAFLSIFED AIKELNYNRI AKICALLFFN FSHSLTTILS FSSPAALMKT LIKFVDLSRN 600
  601 GRNGSNGNDE SSEYETINIS LSFSWAILLI INLTQTYGIS VVDVALKYPE LSIKNSFIIN 660
  661 FISNLPNVSD KYYLEESNVN DSDMLTKSHN TVQSWLCDLF VNGSITDQLI QNIETRQLAN 720
  721 LIPFIVKQVL LSVEIGVLTD ISSLIGGFEY FLQPLLLVGL IKTFYWLEQF LSCVKNDTIS 780
  781 EDILQGIFNL LNTLFNPVTL NEDSKAFHTA VLRLNAIPLL KVLRKFRVQS QSNYGIYSSD 840
  841 AQGDPNLEPL IAKLVAVLNV SPVYDVDPRI INSENDYSRK QLGYGKFLIL NENPINKIMT 900
  901 NQINSFWSLH SSTYYNLDYL FELIELVTPK SFLFDVLKTL EYKLATYGVP GSENKRGSLD 960
  961 SEHVFDYFFY FLVLYDVKTA EEASQLIEYM ENDAKKSKGD VDIKGEDLHE KNDSAEVRQE1020
 1021 TQPKAEATQD DDFDMLFGEN DTSTQAYEEE EENEDNDGNN RTNNVPMIKA EETPSKTNKI1080
 1081 SILKRHSFAV LLHERKLLND LALENGEITK TENEKFISYH DKYLCMLKTC VF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..1132] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle