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Protein Overview: LCP5_YEAST

General Information:
Name(s) found: LCP5_YEAST [Swiss-Prot]
Description(s) found:
  • U3 small nucleolar ribonucleoprotein protein LCP5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LCP5 PE=1 SV=1 [Swiss-Prot]
    • Organism: Saccharomyces cerevisiae S288c
    Length: 357 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSELNALLKD INGSLTATSE SLERLSGIYS NSATDEIPES NQLHEHLFYD AKKPAEKVSL  60
   61 LSLKNGSMLG YINSLLMLIG NRLDDECKDP SAMDARERSI QHRVVLERGV KPLEKKLAYQ 120
  121 LDKLTRAYVK MEKEYKDAEK RALEKSTLVN HSGNDDSEDD ESSEDEIAYR PNTSGIINTN 180
  181 KKSSAYRVEE TAKQENGEEN DDNETGVYKP PKITAVLPPQ QTHFEDRFDA REHKDRSNKS 240
  241 RMQAMEEYIR ESSDQPDWSA SIGADIVNHG RGGIKSLRDT EKERRVTSFE EDNFTRLNIT 300
  301 NKAEKRKQKQ RERNARMNVI GGEDFGIFSS KRKLEDSTSR RGAKKTRSAW DRAQRRL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..129] MSA 1.011983 View MSA. No confident structure predictions are available.
    2 View Details [130..357] deduced N/A No confident structure predictions are available.
    3 View Details [255..357] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle