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Protein Overview: ENSOCUP000000205...

General Information:
Name(s) found: ENSOCUP00000020536 [Oryctolagus_cuniculus.oryCun2.64.pep.all.fa]
tr|G1TU13|G1TU13_RABIT [2016-04-rabbit-yeast-cow-ecoli-ScORC-Arps-WASPs.fasta]
Description(s) found:
Found 2 descriptions.
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  • pep:novel chromosome:oryCun2:10:40065951:40066358:1 gene:ENSOCUG00000005304 transcript:ENSOCUT00000005303 [Oryctolagus_cuniculus.oryCun2.64.pep.all.fa]
  • Uncharacterized protein OS=Oryctolagus cuniculus GN=RPS17 PE=1 SV=1 [2016-04-rabbit-yeast-cow-ecoli-ScORC-Arps-WASPs.fasta]
    • Organism: Oryctolagus cuniculus
    Length: 135 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRVRTKTVK KAARVIIEKY YTRLGNDFHT NKRVCEEIAI IPSKKLRNKI AGYVTHLMKR  60
   61 IQRGPVRGIS IKLQEEERER RDNYVPEVSA LDQEIIEVDP DTKEMLKLLD FGSLSNLQVT 120
  121 QPTVGMNFKT PRGAV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..67] PSI-BLAST 17.0 Solution structure of ribosomal protein S17E from Methanobacterium Thermoautotrophicum, Northeast Structural Genomics Consortium Target TT802 / Ontario Center for Structural Proteomics Target Mth0803
    2 View Details [68..135] Pfam 3.920819 No description for PF00833.9 was found. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural constituent of ribosome
    		•  8.46684512737821 bayes_pls_golite062009
  • structural molecule activity
    		•  7.90461593765642 bayes_pls_golite062009
  • RNA binding
    		•  2.57574983926732 bayes_pls_golite062009
  • binding
    		•  1.30923742450698 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.644832948797119 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle