YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|31873073, gi|...

General Information:
Name(s) found: gi|31873073 [NCBI NR]
gi|30683975 [NCBI NR]
gi|117168159 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|31873073|gb|AAP59444.1| putative chloroplast-targeted copper chaperone [Arabidopsis thaliana] [NCBI NR]
  • gi|30683975|ref|NP_180434.2| copper-binding family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|117168159|gb|ABK32162.1| At2g28660 [Arabidopsis thaliana] [NCBI NR]
  • putative chloroplast-targeted copper chaperone [Arabidopsis thaliana]gi|30683975|ref|NP_180434.2| copper-binding family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Copper-binding family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | copper-binding family protein | chr2:12302496-12304021 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative chloroplast-targeted copper chaperone [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At2g28660 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • copper ion binding / metal ion binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Chloroplast-targeted copper chaperone protein | chr2:12295419-12296944 FORWARD LENGTH=265 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At2g28660 OS=Arabidopsis thaliana GN=At2g28660 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 265 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    Biological Process: copper ion transport [ISS]
    metal ion transport [IEA]
    Molecular Function: copper ion binding [ISS]
    metal ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFSDIFCSS PASTAVRHST LHHDGNVTGG RRSFQSHLRS QNPSKKKDKT VPCFSSEMPL  60
   61 IPIPRHLSCR NSFESPSGFR PKIASARGSD VQIRRKSSAD VSDLRRSRSS LLSSSSRYLL 120
  121 KDHKSLKGDD KDLWLSSDRS KDLILYRDRN VTSSASSSSS SSSSSFSSSV TNVSSPAPST 180
  181 DDQVVVLRVS IHCKGCEGKV RKHISKMEGV TSYTIDLATK KVTVVGKITP VGLVESISKV 240
  241 KFAQLWPSSS SPPFPHIPNY SLLKS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..106] PSI-BLAST 13.69897 Second Metal Binding Domain of the Menkes ATPase
    2 View Details [107..265] PSI-BLAST 25.0 Structure characterization of the water soluble region of P-type ATPase CopA from Bacillus subtilis

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.246147507070597 bayes_pls_golite062009
    2
    Term Confidence Notes
  • binding
    		•  0.246147507070597 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle