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Protein Overview: SUV3M_ARATH

General Information:
Name(s) found: SUV3M_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|5823579|emb|CAB53782.1| mitochondrial RNA helicase [Arabidopsis thaliana] [NCBI NR]
  • gi|31711986|gb|AAP68349.1| At4g14790 [Arabidopsis thaliana] [NCBI NR]
  • gi|30682998|ref|NP_193215.2| ATSUV3; ATP-dependent RNA helicase [Arabidopsis thaliana] [NCBI NR]
  • pir||T52576 ATP-dependent RNA helicase, mitochondrial [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|22655093|gb|AAM98137.1| RNA helicase like protein [Arabidopsis thaliana] [NCBI NR]
  • DExH-box ATP-dependent RNA helicase DExH16, mitochondrial OS=Arabidopsis thaliana GN=SUV3 PE=1 SV=1 [Swiss-Prot]
  • At4g14790 [Arabidopsis thaliana]gi|22655093|gb|AAM98137.1| RNA helicase like protein [Arabidopsis thaliana]gi|5823579|emb|CAB53782.1| mitochondrial RNA helicase [Arabidopsis thaliana]gi|25453518|pir||T52576 ATP-dependent RNA helicase, mitochondrial [im [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 ATP-dependent RNA helicase, mitochondrial (SUV3) [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: EDA15, ATSUV3 | ATSUV3 (embryo sac development arrest 15) | chr4:8496346-8499824 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • mitochondrial RNA helicase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ATSUV3 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • RNA helicase like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At4g14790 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ATSUV3, EDA15 | ATP-dependent RNA helicase, mitochondrial (SUV3) | chr4:8496351-8499829 REVERSE LENGTH=571 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • ATP-dependent RNA helicase, mitochondrial (SUV3) OS=Arabidopsis thaliana GN=suv3 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 571 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDA]
    Biological Process: RNA metabolic process [IDA]
    megagametogenesis [IMP]
    pollen development [IMP]
    Molecular Function: ATP-dependent RNA helicase activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYSVVRLRK VSALGISRVL QADKGSLWRF HFEPEFGDLL RLGVLTRNYR KNSGSPKFDF  60
   61 TGTGTTSKFD FTDLTCPHTW YPIARKKKRK VILHVGPTNS GKTYSALKHL EQSSSGVYCG 120
  121 PLRLLAWEVA KRLNKANVPC DLITGQEKDL VEGATHKAVT VEMADVTSVY DCAIIDEIQM 180
  181 VGCKQRGFAF TRALLGIAAD ELHLCGDPAV VPLVEDILKV TGDDVEVHTY ERLSPLVPLK 240
  241 VPVSSVSSIK TGDCLVTFSR KDIYAYKKTI ERAGKHLCSV VYGSLPPETR TAQATRFNDE 300
  301 TNDFDVLVAS DAIGMGLNLN ISRIIFSTLQ KYDGSETRDL TVSEIKQIAG RAGRFQSKFP 360
  361 IGEVTCLHKE DLPLLHSSLK SPSPILERAG LFPTFDLLSG YSQAHPTHGL YQILEHFVEN 420
  421 AKLSSNYFIS NVEDMMKVAA IVDELPLGLQ EKYLFVVSPV DVNDEISGQG LAQFAQNFSK 480
  481 AGIVRLREIL APDRVKVPKT PTELKELESI HKVLDLYVWL SLRLEDSFPD REVAASQKSI 540
  541 CNLLIEQFLE GNRLNSPARF SRYLRRQKLS E

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..75] PSI-BLAST 31.0 RecG, N-terminal domain; RecG "wedge" domain; RecG helicase domain
    2 View Details [76..571] PSI-BLAST 50.045757 Structure of the RecQ Catalytic Core

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  0.470983068319171 bayes_pls_golite062009
  • hydrolase activity
    		•  0.0582794297634999 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.55

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle