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Protein Overview: gi|42519684, gi|...

General Information:
Name(s) found: gi|42519684 [NCBI NR]
gi|41583973 [NCBI NR]
Description(s) found:
Found 5 descriptions.
SHOW ALL
  • gi|42519684|ref|NP_965614.1| hypothetical protein LJ0641 [Lactobacillus johnsonii NCC 533] [NCBI NR]
  • gi|41583973|gb|AAS09580.1| hypothetical protein LJ_0641 [Lactobacillus johnsonii NCC 533] [NCBI NR]
    • Organism: Lactobacillus johnsonii NCC 533
    Length: 1563 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVPTNQTNN LNEETNQNES TVSITGAKTN DSLIAGVTQG AINVHINNHA TTPLTINHGE  60
   61 QVNVSINDKN NLLSFNVNPT KTSEFDMNRT DTAANKEFTF TYTGSDDGIL SGFDATFPFN 120
  121 ADTTATTQYY EKYGTYPDLT LPVTVTLPNK QSFTQNLPIK INPYEDKVIN EEILHGFIIG 180
  181 PKVIWTPGED GNPGANGVYT EYGANYTGPE PSAKADIPVA QQKDARLMQY AIDWNYGSST 240
  241 NPSLKPLLNV LAHIKFSSGQ RILPSTIKVF KIPSNIKVVA SDGQRISIND YYSKISTLSE 300
  301 DTNFENFLRN SISNDGREIV IDQKGNFTVN GEDYSKNGPY FIQLDTQLDI NKIPDWINTP 360
  361 SSGPSISTPT TNENDWNPSG SGSTANTFTQ TYTNFKLDPT VDRIIKIRFI DENTNQEIPN 420
  421 SAKNIITATN SSVPNPTMDI IKDLEERHYV LDQEATEGKN GSHSENLTNY NIATQNFKLD 480
  481 SLNNSYNSEE INVKNTSPKY YVYLYHETKP QSQTSSVTET INYVCANGTK KGELAALPYT 540
  541 HTVTYTRNGI EDLVTNYIDW NSWMPDSTFN AVNSPIASDS AYSLIDPLVV PAIETNISEN 600
  601 GEITTQNSIP LSYTVNYYAP EKATLHFYDD TDKQDLTAYL LQNNQTAVIN DIYDKADNNS 660
  661 TKQAISFAGV DKVIDFLNSK HYVFSGVSGI GSTSSSDYSK ISYGNFDDDE TQDQNFVLHF 720
  721 KHETEPISDT KEVTETIHYL YEDNSQAAND VKHSVTFTKT GTKDLVTGKE NSKWSAVQTF 780
  781 PEVVSPVISG YTPTQSKIAP ISVDHTSNDI DKTVIYTANK QQATLRFYDD SSKKFIDFAK 840
  841 DLIVTGSSSS PILFTIPKSY DFSNYNFVAV NKGDNPTQTT DSLSGTTLND VTYGKFDTDN 900
  901 TTNQYFIAHF THKISPVNEN KSISEKAILY AENGPRKDNI FKTLNLGNIN FIRTGQKDLV 960
  961 NQQITWDAWN VENKAQNISI SEIIFNVYKL NSQNISQPSS TLKKFELNGH EISPIEFDKK1020
 1021 QDQALIITLP NNFEFLIKVP YVLTENITVI YKDDTTNEIL ERQVLSGQPD TSSQYSTKNT1080
 1081 ITKYLAKNYL LVSDPTNQQT LSFDNTEDPD DQTYVVHFKH QFEEINNSKS IKETINYIYD1140
 1141 NGTEAAPSYT NSIQFVQSGE VDLVTNIRKI KDWTPSISSF SAVKSPIING YTTDHKQIDQ1200
 1201 QFITPNSKDL VFNVVYTAEP VKPTKPVQPI KPMQPTKPVQ PTKPVQPTKP VEPTKPVQPT1260
 1261 KPVQPTKPVE PTKPVQPTKP VEPTKPVQPT KPVQPTKPIE PTKPVKPTKP VEPTKPVKPT1320
 1321 KPVKPTKPVE PIKPVKPTKP VQPTKPVEPI KPVKPTKPVQ PTKPVEPIKP VKPTKPVQPT1380
 1381 KPVKPTKPVE PTKPVQPIKP VQPTKPVQPT KPVEPTKPVE PTKPVRPTKP VEPTKPVKPT1440
 1441 KPVEPTKPVQ PTKPIEPTKP VEPTKPVQTT KPVEPTKPVQ PTKLTISTSL HKSSDKLTQL1500
 1501 THQSYQNSKV SRQNTNNISV QKKKILPQTG TKTTDIGILG LALATAASLL GLISDKVNRK1560
 1561 KHN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..189] MSA 1.058995 View MSA. No confident structure predictions are available.
    2 View Details [190..355] deduced N/A No confident structure predictions are available.
    3 View Details [356..591] deduced N/A No confident structure predictions are available.
    4 View Details [592..677] deduced N/A No confident structure predictions are available.
    5 View Details [678..891] deduced N/A No confident structure predictions are available.
    6 View Details [892..1081] deduced N/A No confident structure predictions are available.
    7 View Details [1082..1203] deduced N/A No confident structure predictions are available.
    8 View Details [1204..1295] deduced N/A No confident structure predictions are available.
    9 View Details [1296..1473] MSA 2.100997 View MSA. No confident structure predictions are available.
    10 View Details [1474..1563] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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