YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: PYRH_LACJO

General Information:
Name(s) found: PYRH_LACJO [Swiss-Prot]
Description(s) found:
SHOW ONLY BEST
  • gi|42519370|ref|NP_965300.1| uridylate kinase [Lactobacillus johnsonii NCC 533] [NCBI NR]
  • gi|41583658|gb|AAS09266.1| uridylate kinase [Lactobacillus johnsonii NCC 533] [NCBI NR]
  • Uridylate kinase OS=Lactobacillus johnsonii (strain CNCM I-12250 / La1 / NCC 533) GN=pyrH PE=3 SV=1 [Swiss-Prot]
  • uridylate kinase [Lactobacillus johnsonii NCC 533]gi|41583658|gb|AAS09266.1| uridylate kinase [Lactobacillus johnsonii NCC 533] [nrdb_11152004_Chlamydomonas]
  • uridylate kinase [Lactobacillus johnsonii NCC 533] [nr-271106-contam.fasta]
    • Organism: Lactobacillus johnsonii NCC 533
    Length: 241 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQVKYKRII LKVSGEALAG EKGTGINPEV IKHLAEEIKS VHDMGVEIGI VCGGGNMWRG  60
   61 ETGANLGMER AQADYMGMLA TIMNGLALQD GLENLGVPTR VQTSIEMRQI AEPYIRRKAV 120
  121 RHLEKGRVVI FGGGTGNPYF STDTTAALRA AEINADVILM AKNGVDGVYS ADPKVDPNAK 180
  181 KYSELTQLDL ISKNLKVMDS TASSLSMDNN IPLVVFNVNK PGNIKKVVMG ENIGTVIKGD 240
  241 K

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..241] PSI-BLAST 57.0 Crystal structure of a putative uridylate kinase (UMP-kinase) from Streptococcus pyogenes

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • kinase activity
    		•  5.43826659128409 bayes_pls_golite062009
  • nucleobase, nucleoside, nucleotide kinase activity
    		•  4.76215533422168 bayes_pls_golite062009
  • nucleotide kinase activity
    		•  4.36245911991838 bayes_pls_golite062009
  • phosphotransferase activity, phosphate group as acceptor
    		•  4.17538459617947 bayes_pls_golite062009
  • uridylate kinase activity
    		•  3.54453921304057 bayes_pls_golite062009
  • catalytic activity
    		•  3.20382750184555 bayes_pls_golite062009
  • transferase activity
    		•  2.54481238004476 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.89315414622708 bayes_pls_golite062009
  • phosphotransferase activity, carboxyl group as acceptor
    		•  1.02979719559565 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle