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Protein Overview: gi|53980846

General Information:
Name(s) found: gi|53980846 [NCBI NR]
Description(s) found:
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  • gi|53980846|gb|AAV24767.1| unknow protein [Oryza sativa Japonica Group] [NCBI NR]
  • unknow protein [Oryza sativa (japonica cultivar-group)] [nrdb_11152004_Chlamydomonas]
    • Organism: Oryza sativa Japonica Group
    Length: 695 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEPVVPPRA PAAHAAVAAP KPPGDAVAAE GEARAPPRPP PAVAAGAGAG ASGGGRRVFS  60
   61 VELRPGETTI VSWRKMLKEA DLGAALPPPP PAAAAQPAVA PLPGPSGATH PTENDCAQSN 120
  121 RFNSVIEKIE RLYMGKNSSD EEDLDDAPDD DQYDTEDSFI DDDELDEYFE VDNFATKHNG 180
  181 YFVNKGKLEQ IDFDSVQTVE PKKRRRKDSS SSYIENNKEF SPGSSSYMGT PLRDSKRSTL 240
  241 QTGKSTSNGH KSGANGTFEY PYSAYRDKDA PGHLGLQQKI TSNGANQDLS KNMHHKEKYN 300
  301 AGQFSGLHAS SNIYSTETMH LATKIHTEGS GTKTKGTRLE RAIRDLQNIV TEYKPQILDV 360
  361 HEAEANCQVA VKRRLPQEVK QKLAKVARLS ANQGKIPEHE LINRLMGIVG HLVHRRTLKR 420
  421 NMKEMVQSGL CAKQEKAGKL QQVKMEIYEM VKARLATKPK GAEHKVESID GFQDPVTHDD 480
  481 RMALRGKSVM DAVLEDRICD LYDLYVEGMD EDKGPQSRKL YLELANLWPH GDMDKVGIRD 540
  541 AISRSKERRN LLYRQRKVRN DQRMKRRRLA AAAKLRDSDP AAPQSAQSLQ NMTSTHTMYP 600
  601 VVNNGNSQSS RSVDKVNEMS VGAGSDGNRS STSMKKRKID SEDRQVNPPK ATAELHHHGI 660
  661 EIQKPAKRAD EATKVSNLPQ TLLAIPSSDS RPSSS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..230] deduced N/A No confident structure predictions are available.
    2 View Details [231..300] deduced N/A No confident structure predictions are available.
    3 View Details [301..507] MSA 1.009961 View MSA. No confident structure predictions are available.
    4 View Details [508..695] MSA 1.007959 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.69

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle