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Protein Overview: gi|52354125, gi|...

General Information:
Name(s) found: gi|52354125 [NCBI NR]
gi|15222951 [NCBI NR]
Description(s) found:
Found 9 descriptions.
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  • gi|52354125|gb|AAU44383.1| hypothetical protein AT1G13810 [Arabidopsis thaliana] [NCBI NR]
  • gi|15222951|ref|NP_172836.1| DNA binding / nuclease [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 303 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: DNA binding [IEA]
    nuclease activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRRVFYKRA RDDLSYCHRL LHIPYNEPEP DSKAISEIVG IVSKKEEAVV VTEPTHHWRK  60
   61 NWEDLRKNRL TASNFARAIG FSPDGRRNLW LEKIGAAKPF AGNRATFWDI ENEVEALERY 120
  121 NELTGNEILI PEFVVYKNGE SPEENWLGAS PDGVINVVKD GVTSCGVLEV KCPFDNRDNS 180
  181 KVYPWKKVPY NCVPQLQGLM EIVDTDWLDL YCWTRNGSSL FRVWRDTAFW EDMKPALFDF 240
  241 WQNHVLPARE IYNNFDIKDP QVKLREFKPK HWHEDCKKIM RGAERISANA NRLFYEIDGN 300
  301 LVD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..303] PSI-BLAST 32.69897 lambda exonuclease

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.286388432783973 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle