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Protein Overview: IDH5_ARATH

General Information:
Name(s) found: IDH5_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75249591|sp|Q945K7.1|IDH5_ARATH RecName: Full=Isocitrate dehydrogenase [NAD] catalytic subunit 5, mitochondrial; AltName: Full=Isocitric dehydrogenase 5; AltName: Full=NAD(+)-specific ICDH 5; AltName: Full=IDH-V; Flags: Precursor [NCBI NR]
  • gi|30725594|gb|AAP37819.1| At5g03290 [Arabidopsis thaliana] [NCBI NR]
  • gi|20466714|gb|AAM20674.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18414179|ref|NP_568113.1| isocitrate dehydrogenase, putative / NAD+ isocitrate dehydrogenase, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|15724320|gb|AAL06553.1|AF412100_1 W25EPL23M/W25EPL23M [Arabidopsis thaliana] [NCBI NR]
  • Isocitrate dehydrogenase [NAD] catalytic subunit 5, mitochondrial OS=Arabidopsis thaliana GN=IDH5 PE=2 SV=1 [Swiss-Prot]
  • At5g03290 [Arabidopsis thaliana]gi|20466714|gb|AAM20674.1| putative protein [Arabidopsis thaliana]gi|15724320|gb|AAL06553.1| W25EPL23M/W25EPL23M [Arabidopsis thaliana]gi|18414179|ref|NP_568113.1| isocitrate dehydrogenase, putative / NAD+ isocitrate deh [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Isocitrate dehydrogenase [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | isocitrate dehydrogenase, putative / NAD+ isocitrate dehydrogenase, putative | chr5:794042-795938 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • At5g03290 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • W25EPL23M/W25EPL23M [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • isocitrate dehydrogenase (NAD+)/ oxidoreductase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: IDH-V | isocitrate dehydrogenase V | chr5:794043-795939 FORWARD LENGTH=374 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Isocitrate dehydrogenase [NAD] catalytic subunit 5, mitochondrial OS=Arabidopsis thaliana GN=IDH5 PE=1 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 374 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    mitochondrion [IDA]
    Biological Process: metabolic process [IEA][ISS]
    tricarboxylic acid cycle [IEA]
    Molecular Function: ATP binding [IDA]
    isocitrate dehydrogenase (NAD+) activity [ISS]
    zinc ion binding [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTMAANLARR LIGNRSTQIL GAVNSSSGAA SSVARAFCSS TTPITATLFP GDGIGPEIAE  60
   61 SVKKVFTTAG VPIEWEEHYV GTEIDPRTQS FLTWESLESV RRNKVGLKGP MATPIGKGHR 120
  121 SLNLTLRKEL NLYANVRPCY SLPGYKTRYD DVDLITIREN TEGEYSGLEH QVVRGVVESL 180
  181 KIITRQASLR VAEYAFLYAK THGRERVSAI HKANIMQKTD GLFLKCCREV AEKYPEITYE 240
  241 EVVIDNCCMM LVKNPALFDV LVMPNLYGDI ISDLCAGLVG GLGLTPSCNI GEDGVALAEA 300
  301 VHGSAPDIAG KNLANPTALL LSGVMMLRHL KFNEQAEQIH SAIINTIAEG KYRTADLGGS 360
  361 STTTEFTKAI CDHL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..374] PSI-BLAST 107.0 No description for 2d1cA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle