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Protein Overview: TYW23_ARATH

General Information:
Name(s) found: TYW23_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • tRNA wybutosine-synthesizing protein 2/3/4 OS=Arabidopsis thaliana GN=At4g04670 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 995 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: wybutosine biosynthetic process [ISS]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFEKRKAAT LASIRSSVTD KSPKGFLDEP IIPLLETINH HPSYFTTSSC SGRISILSQP  60
   61 KPKSNDSTKK KARGGSWLYI THDPADSDLV ISLLFPSKSN QIDPIDQPSE LVFRFEPLII 120
  121 AVECKDLGSA QFLVALAISA GFRESGITSC GDGKRVIIAI RCSIRMEVPI GDTEKLMVSP 180
  181 EYVKFLVDIA NEKMDANRKR TDGFSVALAS NGFKNPDEND VDEDDNYENL AANHDSSINN 240
  241 GNLYPGVQKE LIPLEKLSIV GEPVEKLHLW GHSACTIDES DRKEVIVFGG FGGFGRHARR 300
  301 NESLLLNPSC GTLKLIAVNE SPSARLGHTA SMVGDFMFVI GGRADPLNIL NDVWRLDIST 360
  361 GEWSSQRCVG SEFPPRHRHA AASVGTKVYI FGGLYNDKIV SSMHILDTKD LQWKEVEQQG 420
  421 QWPCARHSHA MVAYGSQSFM FGGYNGENVL NDLYSFDVQS CSWKLEVISG KWPHARFSHS 480
  481 MFVYKHTIGI IGGCPVSQNC QELTLLDLKH RLWRSVRLEF MNKELFVRST ASILGDDLIV 540
  541 IGGGAACYAF GTKFSEPVKI NLVQSVTMSE NHLPPQPEDV SLESNKNNAD LKTETSLSQP 600
  601 WVIQLERKYA KFGKDILKSF GWLDLERKVY SNEKGLCICF PVTENFSELF HEKQLLGKDF 660
  661 ERSEENNLTK GLSLKDISCS AALNLLKEHG AKKLINVAFE AKKVAKSPLQ RMREDITSIL 720
  721 KQKGLPEELL DELPQKWERL GDIVVVPATS FKDPTWSSIN DEVWCAVSKS LSANRLARQG 780
  781 RVEPNGTRDS TLEILVGDNG WVNHRENGIL YSFDATKCMF SWGNLSEKLR MGNMACENEV 840
  841 VVDLFAGIGY FVLPFLVRAK AKLVYACEWN PHAIEALRRN VEANSVSERC IILEGDNRIT 900
  901 APKGVADRVN LGLIPSSEGS WVTAIQALRP EGGILHVHGN VKDSDESSWG EHVTKTLSDI 960
  961 ARAEGRSWEV TVEHIEKVKW YAPRIRHLVA DVRCR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..257] PSI-BLAST 12.69897 No description for 2drvA was found.
    2 View Details [258..396] PSI-BLAST 75.0 No description for 2vpjA was found.
    3 View Details [397..751] PSI-BLAST 3.221849 No description for 2cn3A was found.
    4 View Details [752..995] PSI-BLAST 23.69897 Crystal structure of Hypothetical protein PH0793


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle