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Protein Overview: RL4P_YEAST

General Information:
Name(s) found: RL4P_YEAST [Swiss-Prot]
Description(s) found:
Found 2 descriptions.
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  • 54S ribosomal protein YmL6, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YML6 PE=1 SV=1 [Swiss-Prot]
    • Organism: Saccharomyces cerevisiae S288c
    Length: 286 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIKRNLVKT LQSIRYQATT ATAHAESTLN PLPNAAIPPK YALVTVRSFP SLEPLTFVPV  60
   61 PTSTVAAPLR RDILWRAVVY ENDNRRVGAS NPPGRSENGF SRRKLMPQKG SGRARVGDAN 120
  121 SPTRHNGGRA LARTAPNDYT TELPSKVYSM AFNNALSHQY KSGKLFVIGG EKVDLISPTP 180
  181 ELDLNRLDLV NTNTVEGKEI FEGEVIFRKF LEEFQLKGKR LLFITDKTRE GLIKSSDPYK 240
  241 QKVDVIQKEL VEVNDILRAQ AVFIELEALE YLAMAHQKEI LHSVSN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..286] PSI-BLAST 108.440336 Ribosomal protein L4

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural constituent of ribosome
    		•  9.46714384821627 bayes_pls_golite062009
  • structural molecule activity
    		•  8.89019844429202 bayes_pls_golite062009
  • binding
    		•  1.20549540301208 bayes_pls_golite062009
  • protein binding
    		•  0.69049990447008 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.570954007051262 bayes_pls_golite062009
  • RNA binding
    		•  0.514741551458219 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle