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Protein Overview: gi|79486517, gi|...

General Information:
Name(s) found: gi|79486517 [NCBI NR]
gi|52218818 [NCBI NR]
gi|48596987 [NCBI NR]
gi|110741804 [NCBI NR]
Description(s) found:
Found 12 descriptions.
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  • gi|79486517|ref|NP_194248.2| DNA binding / DNA-directed RNA polymerase [Arabidopsis thaliana] [NCBI NR]
  • gi|52218818|gb|AAU29479.1| At4g25180 [Arabidopsis thaliana] [NCBI NR]
  • gi|48596987|gb|AAT46034.1| At4g25180 [Arabidopsis thaliana] [NCBI NR]
  • gi|110741804|dbj|BAE98845.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 311 amino acids

    Gene Ontology:
    Cellular Component: DNA-directed RNA polymerase III complex [IEA]
    Biological Process: transcription from RNA polymerase III promoter [IEA]
    Molecular Function: DNA binding [IEA]
    DNA-directed RNA polymerase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSGEQKSKR RFQPNPPRPS RRLPIAPTSN TEAEEDEENI KASRQFDRRI VGRRPKTETK  60
   61 ASSPEVAFQP SLSPLAIRSF GVPKEDDKPN SDVNPSSPAS ILPAVSSVTA AQEDGEEVHN 120
  121 FVTRTGDDYV EPWDYRNSYY PTVLPLRKPN SGDIELLDQE EFGEVAKNRD YDENTINSAE 180
  181 ELGLTSVQHS KKQMFIFKIP DCLPVVKQTT GATTKRSVRE YSSGISNPFE GLPEGFMGKM 240
  241 LVYKSGAVKL KVGDALFDVS PGPGTKIPND VVAIDIKGRN CSRIGSSAKF VTVTPDVESL 300
  301 LNPASDMETQ K

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..166] deduced N/A No confident structure predictions are available.
    2 View Details [167..311] Pfam 50.167491 No description for PF05132.6 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle