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Protein Overview: CE37425

General Information:
Name(s) found: CE37425 [WormBase]
Description(s) found:
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  • WBGene00021442 status:Confirmed UniProt:Q965X3 protein_id:CCD73773.1 [WormBase]
  • gi|71993392|ref|NP_497456.2| hypothetical protein Y39A3CL.4 [Caenorhabditis elegans] [NCBI NR]
  • gi|51988128|gb|AAK68885.2|AC024763_4 Hypothetical protein Y39A3CL.4a [Caenorhabditis elegans] [NCBI NR]
  • Hypothetical protein Y39A3CL.4a [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • CE37425 WBGene00021442 status:Confirmed TR:Q965X3 protein_id:AAK68885.2 [wormpep150.fasta]
  • CE37425 WBGene00021442 status:Partially_confirmed TR:Q965X3 protein_id:AAK68885.2 [wormpep132.fasta]
  • 37425 WBGene00021442 status:Confirmed TR:Q965X3 protein_id:AAK68885.2 [wormpep150-phg-orf-ecoli-rand.fasta]
  • CE37425 WBGene00021442 status:Confirmed UniProt:Q965X3_CAEEL protein_id:AAK68885.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE37425 WBGene00021442 status:Confirmed UniProt:Q965X3_CAEEL protein_id:AAK68885.2| [wormORF-contam.fasta]
  • Y39A3CL.4a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE37425 WBGene00021442 status:Confirmed UniProt:Q965X3 protein_id:AAK68885.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE37425 WBGene00021442 status:Confirmed UniProt:Q965X3 protein_id:CCD73773.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Isoform of H2L0P9, Uncharacterized protein OS=Caenorhabditis elegans GN=CELE_Y39A3CL.4 PE=1 SV=2 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 411 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: DNA repair [IMPLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCIRKLKMGN DSSKHKSDVK TEKVGSEIEK ASNPTLEAYF TRISDGKNEI SAEKLKSIFQ  60
   61 QDLSGSLMKY LTGDTNSNLV THQQFMDKFT PLYGTSTDIY VKILQPVHHF LKVCSDSAGA 120
  121 GAIQGDEQFI KILVEEMTDG KTGDEATQSI IRWRRENCEK FTQAVQNRVV SAVTDTKIIN 180
  181 PDYSSDILSP LQMWYLQSSL PAVYFPAKPT ETSGESHWTP LYTSLQHGIS TNRFETLVFD 240
  241 YRGPTVTIFR MKDGRVVVIA ADQEWRHSGN RFGGTFTSFF EIVPNIRRID GANSIYCNLK 300
  301 LRSSAYGLSF KNELKIEKDF DEILDIEVWG CAGAGTLADQ QKLKNWQKQQ TEKHKRVPLP 360
  361 GNWDDNPDKT LLEMAGFQFS TERAQMEMES KKRDAQAAYV EAATASETSE K

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..76] MSA 1.060988 View MSA. No confident structure predictions are available.
    2 View Details [77..188] MSA 1.219997 View MSA. No confident structure predictions are available.
    3 View Details [189..411] Pfam 38.537602 No description for PF07534.7 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle