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Protein Overview: gi|606148|gb|AAA...

General Information:
Name(s) found: gi|606148|gb|AAA58011.1| [nr-271106-contam.fasta]
Description(s) found:
  • sigma cross-reacting protein 27A [Escherichia coli] [nr-271106-contam.fasta]
    • Organism: Escherichia coli str. K-12 substr. MG1655
    Length: 220 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MITMKKIGVI LSGCGVYDGS EIHEAVLTLL AISRSGAQAV CFAPDKQQVD VINHLTGEAM  60
   61 TETRNVLIEA ARITRGEIRP LAQADAAELD ALIVPGGFGA AKNLSNFASL GSECTVDREL 120
  121 KALAQAMHQA GKPLGFMCIA PAMLPKIFDF PLRLTIGTDI DTAEVLEEMG AEHVPCPVDD 180
  181 IVVDEDNKIV TTPAYMLAQN IAEAASGIDK LVSRVLVLAE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..220] PSI-BLAST 53.522879 Putative sigma cross-reacting protein 27A (SCRP-27A, EllB)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.30391542469987 bayes_pls_golite062009
  • protein binding
    		•  1.06565672438103 bayes_pls_golite062009
  • ligase activity
    		•  0.606811845310629 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.59602498623822 bayes_pls_golite062009
  • binding
    		•  0.588714599255874 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle