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Protein Overview: gi|1524397|gb|AA...

General Information:
Name(s) found: gi|1524397|gb|AAC44368.1| [nr-271106-contam.fasta]
Description(s) found:
  • glycine betaine transporter OpuD [nr-271106-contam.fasta]
    • Organism: Bacillus subtilis subsp. subtilis str. JH642
    Length: 512 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKHISSVFW IVIAITAAAV LWGVISPDSL QNVSQSAQAF ITDSFGWYYL LVVSLFVGFC  60
   61 LFLIFSPIGK IKLGKPDEKP EFGLLSWFAM LFSAGMGIGL VFYGAAEPIS HYAISSPSGE 120
  121 TETPQAFRDA LRYTFFHWGL HAWAIYAIVA LCIAYFQFRK GAPGLISSTL SPILGDKVNG 180
  181 PIGKAIDCIA VFATVVGVST SLGLGATQIN GGLNYLFGIP NAFIVQLVLI IIVTVLFLLS 240
  241 AWSGLGKGIK YLSNTNMVLA GLLMLFMLVV GPTVLIMNSF TDSIGQYIQN IVQMSFRLTP 300
  301 NDPEKREWIN SWTIFYWAWW ISWSPFVGIF IARVSRGRTI REFLIGVLVT PCILTFLWFS 360
  361 IFGVSAMDLQ QKGAFNVAKL STETMLFGTL DHYPLTMVTS ILALILIAVF FITSADSATF 420
  421 VLGMQTSYGS LNPANSVKLS WGIIQSAMAA VLLYSGGLAA LQNTAILAAL PFSIVILLMI 480
  481 ASLYQSLSKE RREIKKAEKL DKPRSPRVKK AY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..180] MSA 3.192958 View MSA. No confident structure predictions are available.
    2 View Details [181..270] MSA 1.192996 View MSA. No confident structure predictions are available.
    3 View Details [271..512] MSA 3.18497 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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