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Protein Overview: gi|606358|gb|AAA...

General Information:
Name(s) found: gi|606358|gb|AAA58221.1| [nr-271106-contam.fasta]
gi|16131297|ref|NP_417881.1| [nr-271106-contam.fasta]
gi|1789829|gb|AAC76448.1| [nr-271106-contam.fasta]
gi|16131297|ref|NP_417881.1|: [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
Description(s) found:
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  • CG Site No. 688 [Escherichia coli] [nr-271106-contam.fasta]
  • DNA-binding transcriptional repressor [Escherichia coli K12] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • DNA-binding transcriptional repressor [Escherichia coli str. K-12 substr. MG1655] [Ecoli-contam-Dam1-Mind-COMA-MBP-110.fasta]
    • Organism: Escherichia coli str. K-12 substr. MG1655
    Length: 252 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA]
    Biological Process: glycerol metabolic process [IEA]
    transcription [IEA]
    regulation of transcription, DNA-dependent [IEA]
    Molecular Function: DNA binding [IEA]
    transcription factor activity [IEA]
    protein binding [IPILink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQTQRHNGI IELVKQQGYV STEELVEHFS VSPQTIRRDL NELAEQNLIL RHHGGAALPS  60
   61 SSVNTPWHDR KATQTEEKER IARKVAEQIP NGSTLFIDIG TTPEAVAHAL LNHSNLRIVT 120
  121 NNLNVANTLM VKEDFRIILA GGELRSRDGG IIGEATLDFI SQFRLDFGIL GISGIDSDGS 180
  181 LLEFDYHEVR TKRAIIENSR HVMLVVDHSK FGRNAMVNMG SISMVDAVYT DAPPPVSVMQ 240
  241 VLTDHHIQLE LC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..70] PSI-BLAST 10.045757 No description for 2gqqA was found.
    2 View Details [71..252] PSI-BLAST 16.39794 No description for 2pjmA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle