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Protein Overview: gi|125986696|ref...

General Information:
Name(s) found: gi|54645438|gb|EAL34177.1| [nr-271106-contam.fasta]
gi|125986696|ref|XP_001357111.1| [NCBI-RefSeq_Human_na_04-23-2010_reversed.fasta]
Description(s) found:
Found 2 descriptions.
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  • GA15543-PA [Drosophila pseudoobscura] [nr-271106-contam.fasta]
  • GA15543 [Drosophila pseudoobscura pseudoobscura] [NCBI-RefSeq_Human_na_04-23-2010_reversed.fasta]
    • Organism: Drosophila pseudoobscura pseudoobscura
    Length: 128 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQIFVKTLTG KTITLEVEPS DTIENVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLSDYN  60
   61 IQKESTLHLV LRLRGGIIEP SLRILAQKYN CDKMICRKCY ARLHPRATNC RKKKCGHTNN 120
  121 LRPKKKLK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..72] PSI-BLAST 36.69897 No description for 2ojrA was found.
    2 View Details [73..128] FFAS03 2.9 No description for 2ayjA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • structural constituent of ribosome
    		•  9.67761199764219 bayes_pls_golite062009
  • structural molecule activity
    		•  9.13063837111868 bayes_pls_golite062009
  • binding
    		•  1.81525505623128 bayes_pls_golite062009
  • protein binding
    		•  1.39181618480952 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle