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Protein Overview: GIF3_ARATH

General Information:
Name(s) found: GIF3_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|21539894|gb|AAM52883.1| GRF1-interacting factor 3 [Arabidopsis thaliana] [NCBI NR]
  • gi|18411458|ref|NP_567194.1| GIF3 (GRF1-INTERACTING FACTOR 3); protein binding / transcription coactivator [Arabidopsis thaliana] [NCBI NR]
  • gi|15450537|gb|AAK96446.1| AT4g00850/A_TM018A10_22 [Arabidopsis thaliana] [NCBI NR]
  • gi|14190377|gb|AAK55669.1|AF378866_1 AT4g00850/A_TM018A10_22 [Arabidopsis thaliana] [NCBI NR]
  • GRF1-interacting factor 3 OS=Arabidopsis thaliana GN=GIF3 PE=1 SV=1 [Swiss-Prot]
  • GRF1-interacting factor 3 [Arabidopsis thaliana]gi|15450537|gb|AAK96446.1| AT4g00850/A_TM018A10_22 [Arabidopsis thaliana]gi|14190377|gb|AAK55669.1| AT4g00850/A_TM018A10_22 [Arabidopsis thaliana]gi|18411458|ref|NP_567194.1| SSXT family protein [Arabidop [nrdb_11152004_Chlamydomonas]
  • | Symbols: GIF3 | GIF3 (GRF1-INTERACTING FACTOR 3) | chr4:357675-358928 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • AT4g00850/A_TM018A10_22 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • GIF3 (GRF1-INTERACTING FACTOR 3) [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • GRF1-interacting factor 3 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: GIF3 | GRF1-interacting factor 3 | chr4:357675-358928 FORWARD LENGTH=223 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 223 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ISS]
    Biological Process: cell proliferation [IEP]
    leaf development [IMP]
    Molecular Function: protein binding [IPI]
    transcription coactivator activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQQSPQMIPM VLPSFPPTNN ITTEQIQKYL DENKKLIMAI LENQNLGKLA ECAQYQALLQ  60
   61 KNLMYLAAIA DAQPQPPAAT LTSGAMTPQA MAPNPSSMQP PPSYFMQQHQ AVGMAQQIPP 120
  121 GIFPPRGPLQ FGSPHQFLDP QQQLHQQAMQ GHMGIRPMGL NNNNGLQHQM HHHETALAAN 180
  181 NAGPNDASGG GKPDGTNMSQ SGADGQGGSA ARHGGGDAKT EGK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..86] Pfam 11.823909 No description for PF05030.3 was found. No confident structure predictions are available.
    2 View Details [87..223] PSI-BLAST 6.522879 Sec24


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle