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Protein Overview: DET1_ARATH

General Information:
Name(s) found: DET1_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
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  • Light-mediated development protein DET1 OS=Arabidopsis thaliana GN=DET1 PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 543 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: DNA repair [IMP]
    negative regulation of photomorphogenesis [IMP]
    Molecular Function: catalytic activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFTSGNVTAR VFERQIRTPP PGASVNRARH FYENLVPSYT LYDVESPDHC FRKFTEDGLF  60
   61 LISFSRNHQE LIVYRPSWLT YSTTDDSTTT LPPLPRRASK FDSFFTQLYS VNLASSNELI 120
  121 CKDFFLYHQT RRFGLFATST AQIHDSSSPS NDAVPGVPSI DKITFVLLRL DDGVVLDERV 180
  181 FLHDFVNLAH NMGVFLYDDL LAILSLRYQR IHLLQIRDSG HLVDARAIGY FCREDDELFL 240
  241 NSSSQAMMSQ DKSKQQSLSG SKEDDTGENG LRHSLSQPSG SNSFLSGVKQ RLLSFIFREI 300
  301 WNEESDNVMR VQSLKKKFYF HFQDYVDLII WKVQFLDRQH LLIKFGSVDG GVTRSADHHP 360
  361 AFFAVYNMET TDIVAFYQNS AEDLYQLFEQ FSDHFTVSSS TPFMNFVTSH SNNVYALEQL 420
  421 KYTKNKSNSF SQFVKKMLLS LPFSCQSQSP SPYFDQSLFR FDEKLISAAD RHRQSSDNPI 480
  481 KFISRRQPQT LKFKIKPGPE CGTADGRSKK ICSFLFHPHL PLAISIQQTL FMPPSVVNIH 540
  541 FRR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..176] MSA 1.011973 View MSA. No confident structure predictions are available.
    2 View Details [177..260] deduced N/A No confident structure predictions are available.
    3 View Details [261..337] deduced N/A No confident structure predictions are available.
    4 View Details [338..400] deduced N/A No confident structure predictions are available.
    5 View Details [401..543] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.88

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle