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Protein Overview: gi|7494191

General Information:
Name(s) found: gi|7494191 [NCBI NR]
Description(s) found:
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  • pir||T18424 hypothetical protein C0155c - malaria parasite (Plasmodium falciparum) [NCBI NR]
  • DNA-directed RNA polymerase subunit I, putative [Plasmodium falciparum 3D7]gi|3647353|emb|CAB10577.1| DNA-directed RNA polymerase subunit I, putative [Plasmodium falciparum 3D7]gi|7494191|pir||T18424 hypothetical protein C0155c - malaria parasite (Plasm [nrdb_11152004_Chlamydomonas]
    • Organism: Plasmodium falciparum
    Length: 163 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKYLCLYFL LDGFNDNYLN EDEDFMGDEF GQGIDSDDGE NYENDIDIIT DHQIKKDNKS  60
   61 DYENSEANED NIRITSPYLT KYEKARIIGT RALQISMNAP LTIPIETSND MINSKNEYDN 120
  121 YLNNDPLVIA EKELYNKSIP FILRRYLPNG SYEDWRLDEL IID

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..163] PSI-BLAST 35.09691 RPB6

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • DNA-directed RNA polymerase activity
    		•  8.95763217796707 bayes_pls_golite062009
  • RNA polymerase activity
    		•  8.95763217796707 bayes_pls_golite062009
  • nucleotidyltransferase activity
    		•  6.40098308297479 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  4.33401073482737 bayes_pls_golite062009
  • transferase activity
    		•  3.84777794959854 bayes_pls_golite062009
  • binding
    		•  2.4602171483686 bayes_pls_golite062009
  • DNA binding
    		•  1.9558633290744 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.91068858292286 bayes_pls_golite062009
  • catalytic activity
    		•  0.902495165806215 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle