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Protein Overview: gi|50878358, gi|...

General Information:
Name(s) found: gi|50878358 [NCBI NR]
gi|222630942 [NCBI NR]
gi|215697253 [NCBI NR]
gi|125593571 [NCBI NR]
gi|115462953 [NCBI NR]
gi|113578627 [NCBI NR]
Description(s) found:
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  • gi|50878358|gb|AAT85133.1| putative sodium/hydrogen exchanger [Oryza sativa Japonica Group] [NCBI NR]
  • gi|222630942|gb|EEE63074.1| hypothetical protein OsJ_17882 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|215697253|dbj|BAG91247.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|125593571|gb|EAZ33630.1| hypothetical protein OsJ_017113 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|115462953|ref|NP_001055076.1| Os05g0276100 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113578627|dbj|BAF16990.1| Os05g0276100 [Oryza sativa Japonica Group] [NCBI NR]
  • putative sodium/hydrogen exchanger [Oryza sativa (japonica cultivar-group)] [nrdb_11152004_Chlamydomonas]
  • Os05g0276100 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 790 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPEAAAAAL KPMKATSDGV FQGEDPLEAA LPLAIVQICI VVVLTRVLAF FLRPLRQPRV  60
   61 IAEIIGGIML GPSAIGRNSA FINTVFPKQS LTVLDTLANI GLLFFLFLVG LELDLRAIRR 120
  121 TGAGALAIAV AGISLPFVLG IGTSVVLQNT VNRGVPTGPF LVFMGVALSI TAFPVLARIL 180
  181 AELKLLTTDL GRMAMSAAAV NDVAAWILLA LAIALSGSGS PFVSLWVLLS GVGFVLSSFF 240
  241 FIRPLLSWMA RRSPEGEPVK ELYICTTLTI VLAAGFITDT IGIHALFGAF IVGIIVPKEG 300
  301 PFAGVLLEKV EDLISGLFLP LYFVSSGLKT NVLTIKGGDS WGLLVLVVAT ACIGKIGGTV 360
  361 LASLIVRVPL REAVTLGVLM NTKGLVELIV LNIGKDRHVL NDETFAILVL MALINTFITT 420
  421 PLVMAIYKPA RRAPPYKNRA VQRPNPDDEL RMMVCFHSTR NIPTMINLME SSRGTRRRGI 480
  481 TVYAMHLVEL SERSSAINMV HKARRNGMPF WNRRRNGDGD QLVVAFETYQ QLSHVSIRAM 540
  541 TAISDLHTIH EDVVTSAHQK RAALIVLPFH KLHQMDGHME SLGDEYQHIN QRVLHHAPCS 600
  601 VGILVDRGLG GAAQVAASDV SYNIVVLFFG GRDDREALSY ATRMVEHPGI ALHVIRFVPE 660
  661 SGGGGANDKA AADDAFLAEF RGKVAGGNDS IRYEERTSRG KADVVEAIKA MGPTNLFLVG 720
  721 QGSPCAPLME PSAECPELGP VGSYLAMPDF STVASVLVMK QYDPTAEHYE LVEEVADTAV 780
  781 DIDTPGPRRG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..447] PSI-BLAST 18.39794 Crystal structure of the Na+/H+ antiporter NhaA
    2 View Details [448..598] FFAS03 2.88 No description for 2gm3A was found.
    3 View Details [599..790] FFAS03 2.58 Crystal Structure of hypothetical protein Rv1636 from Mycobacterium tuberculosis H37Rv

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • catalytic activity
    		•  0.391696273405295 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle