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Protein Overview: gi|30102648, gi|...

General Information:
Name(s) found: gi|30102648 [NCBI NR]
gi|15240823 [NCBI NR]
gi|110736083 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • gi|30102648|gb|AAP21242.1| At5g38020 [Arabidopsis thaliana] [NCBI NR]
  • gi|15240823|ref|NP_198618.1| S-adenosyl-L-methionine:carboxyl methyltransferase family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|110736083|dbj|BAF00014.1| SAMT-like protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 368 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: fatty acid biosynthetic process [TAS]
    Molecular Function: S-adenosylmethionine-dependent methyltransferase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVLSMKGGD GEHSYANNSE GQKRLASDAK PVVVETVKEM IVKTDFPGCI KVADLGCSSG  60
   61 ENTLLVMSEI VNTIITSYQQ KGKNLPEINC CLNDLPDNDF NTTFKLVPAF HKLLKMDVKG 120
  121 KCFISGVPGS FYSRLFPSKS LHFVHSSLCL HWLSKVPDGL EDNKKNVYLR SPCPPNVYKS 180
  181 YLTQFKNDFS LFLRLRADET VPNGRMALTF VGRKSLDPLS KDCFQNWSSI SDSLLDLVSE 240
  241 GIVKESDVDS FNLPFYNPDE SEVREVIESE GSFKISNFET IFGLLFSYKT GRTEVKDDDD 300
  301 NLDQSCRFEV IRKRASIIRS ITEPMLGAHF GDAIMDRLFE RYTYHLAERY DTLRNKPTVQ 360
  361 FFVSLTRK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..368] PSI-BLAST 136.0 CRYSTAL STRUCTURE OF SALICYLIC ACID CARBOXYL METHYLTRANSFERASE (SAMT)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.723277178398499 bayes_pls_golite062009
  • transferase activity
    		•  0.64512166557639 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  0.54403439349476 bayes_pls_golite062009
  • methyltransferase activity
    		•  0.54389223881989 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle