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Protein Overview: NPY1_ARATH

General Information:
Name(s) found: NPY1_ARATH [Swiss-Prot]
Description(s) found:
Found 9 descriptions.
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  • BTB/POZ domain-containing protein NPY1 OS=Arabidopsis thaliana GN=NPY1 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 571 amino acids

    Gene Ontology:
    Cellular Component: late endosome [IDA]
    plasma membrane [IDA]
    Biological Process: inflorescence development [IGI]
    flower development [IGI]
    apical protein localization [IGI]
    phyllome development [IGI]
    response to light stimulus [ISS]
    basipetal auxin transport [IGI]
    positive regulation of flower development [IGI]
    cotyledon development [IGI]
    Molecular Function: protein binding [IEA]
    signal transducer activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFMKLGSKP DTFESDGKFV KYAVSDLDSD VTIHVGEVTF HLHKFPLLSK SNRMQRLVFE  60
   61 ASEEKTDEIT ILDMPGGYKA FEICAKFCYG MTVTLNAYNI TAVRCAAEYL EMTEDADRGN 120
  121 LIYKIEVFLN SGIFRSWKDS IIVLQTTRSL LPWSEDLKLV GRCIDSVSAK ILVNPETITW 180
  181 SYTFNRKLSG PDKIVEYHRE KREENVIPKD WWVEDVCELE IDMFKRVISV VKSSGRMNNG 240
  241 VIAEALRYYV ARWLPESMES LTSEASSNKD LVETVVFLLP KVNRAMSYSS CSFLLKLLKV 300
  301 SILVGADETV REDLVENVSL KLHEASVKDL LIHEVELVHR IVDQFMADEK RVSEDDRYKE 360
  361 FVLGNGILLS VGRLIDAYLA LNSELTLSSF VELSELVPES ARPIHDGLYK AIDTFMKEHP 420
  421 ELTKSEKKRL CGLMDVRKLT NEASTHAAQN ERLPLRVVVQ VLYFEQLRAN HSPVASVAAS 480
  481 SHSPVEKTEE NKGEEATKKV ELSKKSRGSK STRSGGGAQL MPSRSRRIFE KIWPGKGEIS 540
  541 NKSSEVSSGS SQSPPAKSSS SSSRRRRHSI S

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..173] PSI-BLAST 23.221849 No description for 2if5A was found.
    2 View Details [174..325] MSA 5.546991 View MSA. No confident structure predictions are available.
    3 View Details [326..418] MSA 2.166991 View MSA. Confident ab initio structure predictions are available.
    4 View Details [419..571] MSA 2.069984 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle