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Protein Overview: RAP24_ARATH

General Information:
Name(s) found: RAP24_ARATH [Swiss-Prot]
Description(s) found:
Found 10 descriptions.
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  • Ethylene-responsive transcription factor RAP2-4 OS=Arabidopsis thaliana GN=RAP2-4 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 334 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IC][IDA]
    Biological Process: cellular response to salt stress [IEP]
    response to salt stress [IEP]
    response to osmotic stress [IEP]
    red or far-red light signaling pathway [IGI]
    regulation of transcription, DNA-dependent [ISS]
    ethylene mediated signaling pathway [IMP]
    response to light stimulus [IEP]
    response to water deprivation [IEP][IMP]
    Molecular Function: DNA binding [IDA][TAS]
    transcription factor activity [IDA][ISS][TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAMNLYTC SRSFQDSGGE LMDALVPFIK SVSDSPSSSS AASASAFLHP SAFSLPPLPG  60
   61 YYPDSTFLTQ PFSYGSDLQQ TGSLIGLNNL SSSQIHQIQS QIHHPLPPTH HNNNNSFSNL 120
  121 LSPKPLLMKQ SGVAGSCFAY GSGVPSKPTK LYRGVRQRHW GKWVAEIRLP RNRTRLWLGT 180
  181 FDTAEEAALA YDKAAYKLRG DFARLNFPNL RHNGSHIGGD FGEYKPLHSS VDAKLEAICK 240
  241 SMAETQKQDK STKSSKKREK KVSSPDLSEK VKAEENSVSI GGSPPVTEFE ESTAGSSPLS 300
  301 DLTFADPEEP PQWNETFSLE KYPSYEIDWD SILA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..147] deduced N/A No confident structure predictions are available.
    2 View Details [148..211] PSI-BLAST 22.0 SOLUTION STRUCTURE OF THE GCC-BOX BINDING DOMAIN, NMR, MINIMIZED MEAN STRUCTURE
    3 View Details [212..334] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle