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Protein Overview: gi|18402606, gi|...

General Information:
Name(s) found: gi|23296431 [NCBI NR]
gi|18402606 [NCBI NR]
gi|15027919 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|23296431|gb|AAN13115.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18402606|ref|NP_564543.1| pfkB-type carbohydrate kinase family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15027919|gb|AAK76490.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 378 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: D-ribose metabolic process [IEA]
    Molecular Function: ribokinase activity [IEA]
    kinase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPVIIGALI LDVHAKPSTT PISGTTVPGQ VLFAPGGVAR NVADCIFKLG ITPFMIGTLG  60
   61 LDGPANVLLK EWKLSMKGIL RREDISTPIV SLVYDTNGEV AAGVAGVDAV ENFLTPEWIQ 120
  121 RFEYNISSAR LLMVDANLSS LALEASCKLA AESSVPVWFE PVSVTKSQRI ASIAKYVTIV 180
  181 SPNQDELIAM ANALCAKNLF HPFRSDENKL SIEDMFRALK PAILVLLKNG VKVVIVTLGS 240
  241 NGALLCSKGN PKKALNIDRK FLRSGEVFKR VQSVCSPNRF SELGSNRSPS LFAMHFPTIP 300
  301 AKVKKLTGAG DCLVGGTVAS LSDGLDLIQS LAVGIASAKA AVESDDNVPP EFKLDLISGD 360
  361 AELVYNGAKM LMVHQSML

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..378] PSI-BLAST 53.154902 Crystal structure of Ribokinase (TM0960) from Thermotoga maritima at 2.15 A resolution

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.21468720585581 bayes_pls_golite062009
  • transferase activity
    		•  1.02723496131053 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.99166926796598 bayes_pls_golite062009
  • kinase activity
    		•  0.93808159830136 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.55

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle