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Protein Overview: ACCH3_ARATH

General Information:
Name(s) found: ACCH3_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75299765|sp|Q8H1S4.1|ACCH3_ARATH RecName: Full=1-aminocyclopropane-1-carboxylate oxidase homolog 4 [NCBI NR]
  • gi|23296334|gb|AAN13044.1| putative oxidoreductase [Arabidopsis thaliana] [NCBI NR]
  • gi|15221545|ref|NP_172150.1| 2-oxoglutarate-dependent dioxygenase, putative [Arabidopsis thaliana] [NCBI NR]
  • 1-aminocyclopropane-1-carboxylate oxidase homolog 3 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1 [Swiss-Prot]
  • putative oxidoreductase [Arabidopsis thaliana]gi|15221545|ref|NP_172150.1| 2-oxoglutarate-dependent dioxygenase, putative [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 2-oxoglutarate-dependent dioxygenase [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | 2-oxoglutarate-dependent dioxygenase, putative | chr1:2035908-2037185 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative oxidoreductase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr1:2035909-2037186 FORWARD LENGTH=369 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 369 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: 2-oxoglutarate-dependent dioxygenase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEMMKIDPLF DRASELKAFD ETKTGVKGLV DSGVSQVPRI FHHPTVKLST PKPLPSDLLH  60
   61 LKTIPTIDLG GRDFQDAIKR NNAIEEIKEA AAKWGFFQVI NHGVSLELLE KMKKGVRDFH 120
  121 EQSQEVRKEF YSRDFSRRFL YLSNFDLFSS PAANWRDTFS CTMAPDTPKP QDLPEICRDI 180
  181 MMEYSKQVMN LGKFLFELLS EALGLEPNHL NDMDCSKGLL MLSHYYPPCP EPDLTLGTSQ 240
  241 HSDNSFLTVL LPDQIEGLQV RREGHWFDVP HVSGALIINI GDLLQLITND KFISLEHRVL 300
  301 ANRATRARVS VACFFTTGVR PNPRMYGPIR ELVSEENPPK YRETTIKDYA TYFNAKGLDG 360
  361 TSALLHFKI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..369] PSI-BLAST 85.0 No description for 2brtA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
    		•  2.13037944896112 bayes_pls_golite062009
  • oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
    		•  1.96457406152694 bayes_pls_golite062009
  • binding
    		•  1.78258647804494 bayes_pls_golite062009
  • catalytic activity
    		•  0.921320409505 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.778311364997835 bayes_pls_golite062009
  • DNA binding
    		•  0.705906158188305 bayes_pls_golite062009
  • protein binding
    		•  0.200706152890822 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle