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Protein Overview: BASS6_ARATH

General Information:
Name(s) found: BASS6_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|21618116|gb|AAM67166.1| unknown [Arabidopsis thaliana] [NCBI NR]
  • gi|21436155|gb|AAM51324.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18416020|ref|NP_567671.1| bile acid:sodium symporter family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|17529350|gb|AAL38902.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • Probable sodium/metabolite cotransporter BASS6, chloroplastic OS=Arabidopsis thaliana GN=BASS6 PE=2 SV=1 [Swiss-Prot]
  • unknown [Arabidopsis thaliana]gi|21436155|gb|AAM51324.1| unknown protein [Arabidopsis thaliana]gi|17529350|gb|AAL38902.1| unknown protein [Arabidopsis thaliana]gi|18416020|ref|NP_567671.1| bile acid:sodium symporter family protein [Arabidopsis thaliana [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Bile acid:sodium symporter family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | bile acid:sodium symporter family protein | chr4:11991647-11993687 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • bile acid:sodium symporter/ transporter [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Sodium Bile acid symporter family | chr4:11991636-11993676 REVERSE LENGTH=409 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 409 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA][ISS]
    Biological Process: sodium ion transport [IEA][ISS]
    Molecular Function: bile acid:sodium symporter activity [ISS]
    transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVITTPIET LHLKSTLRLL PRAVYRSQRI QVFPPNIFSN TSLSSPLRID PISQVGGSRN  60
   61 LWRRYASDNF SEMGLDPGAD PFKVIEKPSI VDRMKKANSI LPHVVLASTI LALIYPPSFT 120
  121 WFTSRYFVPA LGFLMFAVGI NSNEKDFLEA FKRPKAILLG YVGQYLVKPV LGFIFGLAAV 180
  181 SLFQLPTPIG AGIMLVSCVS GAQLSNYATF LTDPALAPLS IVMTSLSTAT AVLVTPMLSL 240
  241 LLIGKKLPVD VKGMISSILQ VVIAPIAAGL LLNKLFPKVS NAIRPFLPIL SVLDTACCVG 300
  301 APLALNINSV MSPFGATILL LVTMFHLSAF LAGYFLTGSV FRNAPDAKAM QRTLSYETGM 360
  361 QSSLLALALA TKFFQDPLVG IPPAISTVVM SLMGFTLVLI WSKEKSNTF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..115] deduced N/A No confident structure predictions are available.
    2 View Details [116..306] Pfam 68.19382 No description for PF01758.7 was found. No confident structure predictions are available.
    3 View Details [307..409] MSA 10.362996 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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