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Protein Overview: gi|15810022, gi|...

General Information:
Name(s) found: gi|26452426 [NCBI NR]
gi|21555065 [NCBI NR]
gi|18412419 [NCBI NR]
gi|17981661 [NCBI NR]
gi|15810022 [NCBI NR]
Description(s) found:
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  • gi|26452426|dbj|BAC43298.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|21555065|gb|AAM63767.1| contains similarity to C3HC4-type zinc fingers [Arabidopsis thaliana] [NCBI NR]
  • gi|18412419|ref|NP_567261.1| tyrosine specific protein phosphatase family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|17981661|gb|AAL51114.1|AF458342_1 AT4g03960/T24M8_4 [Arabidopsis thaliana] [NCBI NR]
  • gi|15810022|gb|AAL06938.1| AT4g03960/T24M8_4 [Arabidopsis thaliana] [NCBI NR]
  • contains similarity to C3HC4-type zinc fingers [Arabidopsis thaliana]gi|26452426|dbj|BAC43298.1| unknown protein [Arabidopsis thaliana]gi|17981661|gb|AAL51114.1| AT4g03960/T24M8_4 [Arabidopsis thaliana]gi|15810022|gb|AAL06938.1| AT4g03960/T24M8_4 [Arab [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Tyrosine specific protein phosphatase family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | tyrosine specific protein phosphatase family protein | chr4:1887671-1888998 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • AT4g03960/T24M8_4 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • phosphoprotein phosphatase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • contains similarity to C3HC4-type zinc fingers [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Phosphotyrosine protein phosphatases superfamily protein | chr4:1887673-1889000 FORWARD LENGTH=198 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • AT4g03960/T24M8_4 OS=Arabidopsis thaliana GN=At4g03960/T24M8_4 PE=2 SV=1 [ARATH-contam.fasta]
  • AT4g03960/T24M8_4 OS=Arabidopsis thaliana GN=At4g03960 PE=2 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 198 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: dephosphorylation [IEA]
    Molecular Function: phosphoprotein phosphatase activity [ISS]
    protein tyrosine phosphatase activity [IEA]
    phosphatase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLESYAGDV HTVPQSENSM EERGGGELFV PPLNFAMVDN GIFRSGFPEP VSFSFLQSLR  60
   61 LKSIIYLCPE AYPEVNREFA KSNGIQVFQF GIERCKEPFV NIPDEVIREA LQVLLDTENH 120
  121 PVLIHCKSGK HRTGCLVGCV RKIQRWCLSS IFDEYQRFAA AKARISDQRF MELFDISNLK 180
  181 HTPLSFSCSK RYTNTIDY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..198] PSI-BLAST 32.69897 X-ray structure of a putative phosphoprotein phosphatase from Arabidopsis thaliana gene AT1G05000

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • phosphatase activity
    		•  0.511886261720903 bayes_pls_golite062009
  • phosphoric ester hydrolase activity
    		•  0.489130034747747 bayes_pls_golite062009
  • phosphoprotein phosphatase activity
    		•  0.44484690806243 bayes_pls_golite062009
  • hydrolase activity
    		•  0.394861527104862 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.385820467767452 bayes_pls_golite062009
  • catalytic activity
    		•  0.296402108629347 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle