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Protein Overview: NOL_ARATH

General Information:
Name(s) found: NOL_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|94442407|gb|ABF18991.1| At5g04900 [Arabidopsis thaliana] [NCBI NR]
  • gi|21553369|gb|AAM62462.1| unknown [Arabidopsis thaliana] [NCBI NR]
  • gi|18414726|ref|NP_568145.1| short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|134254417|dbj|BAF49742.1| short-chain dehydrogenase/reductase AtNOL1 [Arabidopsis thaliana] [NCBI NR]
  • Chlorophyll(ide) b reductase NOL, chloroplastic OS=Arabidopsis thaliana GN=NOL PE=1 SV=1 [Swiss-Prot]
  • unknown [Arabidopsis thaliana]gi|18414726|ref|NP_568145.1| short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Short-chain dehydrogenase/reductase (SDR) family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | short-chain dehydrogenase/reductase (SDR) family protein | chr5:1434827-1437195 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At5g04900 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • oxidoreductase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: NOL | NYC1-like | chr5:1434826-1437194 FORWARD LENGTH=348 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Chlorophyll(ide) b reductase NOL, chloroplastic OS=Arabidopsis thaliana GN=NOL PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 348 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    Biological Process: PSII associated light-harvesting complex II catabolic process [TAS]
    chlorophyll catabolic process [IDA]
    Molecular Function: oxidoreductase activity [ISS]
    chlorophyll(ide) b reductase activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATWSGFNVS SSPLLRLRSS SVSNVTKLPF LSPICRRRLL AERFGLATVV VTRQNLTVTP  60
   61 SSAAVEARIS GKREPMTPPY NILITGSTKG IGYALAREFL KAGDNVVICS RSAERVETAV 120
  121 QSLKEEFGEH VWGTKCDVTE GKDVRELVAY SQKNLKYIDI WINNAGSNAY SFKPLAEASD 180
  181 EDLIEVVKTN TLGLMLCCRE AMNMMLTQSR GGHIFNIDGA GSDGRPTPRF AAYGATKRSV 240
  241 VHLTKSLQAE LQMQDVKNVV VHNLSPGMVT TDLLMSGATT KQAKFFINVL AEPAEVVAEY 300
  301 LVPNIRAIPA SGSMKPTYIR FLTGIKAYTK IFSRVALGAR KNRYVTEE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..72] PSI-BLAST 13.39794 No description for 2z5lA was found.
    2 View Details [73..348] PSI-BLAST 70.39794 No description for 2p68A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle