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Protein Overview: gi|88011066, gi|...

General Information:
Name(s) found: gi|88011066 [NCBI NR]
gi|21554086 [NCBI NR]
gi|15241056 [NCBI NR]
Description(s) found:
Found 12 descriptions.
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  • gi|88011066|gb|ABD38897.1| At5g27820 [Arabidopsis thaliana] [NCBI NR]
  • gi|21554086|gb|AAM63167.1| unknown [Arabidopsis thaliana] [NCBI NR]
  • gi|15241056|ref|NP_198134.1| ribosomal protein L18 family protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 114 amino acids

    Gene Ontology:
    Cellular Component: ribosome [IEA][ISS]
    intracellular [IEA]
    Biological Process: ribosome biogenesis [ISS]
    translation [IEA]
    Molecular Function: structural constituent of ribosome [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVIPPAVRPP RLFDYLKPYV LKMHFTNKFV HAQVIHSPTA TVACSASSQE KALRETMDIT  60
   61 RDVAAASKIG KILGERLLMK DIPAVTIQMK KEQRYHGKVK AVIDSVREAG VKLL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..114] PSI-BLAST 33.154902 Solution Structure of Ribosomal Protein L18 from Bacillus stearothermophilus

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural molecule activity
    		•  0.48427395152925 bayes_pls_golite062009
  • structural constituent of ribosome
    		•  0.478479888797851 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle