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Protein Overview: PNSB2_ARATH

General Information:
Name(s) found: PNSB2_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|21554059|gb|AAM63140.1| unknown [Arabidopsis thaliana] [NCBI NR]
  • gi|21280797|gb|AAM45001.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18408126|ref|NP_564840.1| NDF2 (NDH-DEPENDENT CYCLIC ELECTRON FLOW 1); carbohydrate binding / catalytic [Arabidopsis thaliana] [NCBI NR]
  • gi|15028029|gb|AAK76545.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • Photosynthetic NDH subunit of subcomplex B 2, chloroplastic OS=Arabidopsis thaliana GN=PNSB2 PE=2 SV=1 [Swiss-Prot]
  • unknown [Arabidopsis thaliana]gi|21280797|gb|AAM45001.1| unknown protein [Arabidopsis thaliana]gi|15028029|gb|AAK76545.1| unknown protein [Arabidopsis thaliana]gi|18408126|ref|NP_564840.1| expressed protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | carbohydrate binding / catalytic | chr1:24061212-24063078 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: NDF2, NDH45 | NDH-dependent cyclic electron flow 1 | chr1:24057549-24059415 FORWARD LENGTH=348 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • NDH-dependent cyclic electron flow 1 OS=Arabidopsis thaliana GN=NDF2 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 348 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    NAD(P)H dehydrogenase complex (plastoquinone) [IDA][IMP]
    chloroplast thylakoid membrane [IDA]
    Biological Process: photosynthetic electron transport in photosystem I [IMP]
    Molecular Function: catalytic activity [IEA]
    carbohydrate binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLISFSLL PKPKAVRSSI SAPQTQTINT EKLEDKFGRK GIKFSESNNI PMVELKVRNG  60
   61 SSLKLSLSDA HVLSYKPKVY WKDEGFEEVL YTVDGDESRG GVGVVIVNGE EPKGGSSVIS 120
  121 GCDWSVKDTD SDAIDALQIE LSCTAGVLDI TYIVSLYPVS MATALVVKNN GRKPVTLKPG 180
  181 IMSYLRFKKR SGAGIQGLKG CSYCPNPPLS SPFELLSPSE AMKAESSGWF GSEEGEKPGI 240
  241 WAVEDSVITL LEKKMSRIYG APPAERLKAV YNTPPSKFET IDQGRGLFFR MIRIGFEEMY 300
  301 VGSPGSMWDK YGKQHYFVCT GPTSMLVPVD VASGETWRGA MVIEHDNL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..348] PSI-BLAST 50.30103 No description for 2ciqA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.57

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle