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Protein Overview: PKSB_ARATH

General Information:
Name(s) found: PKSB_ARATH [Swiss-Prot]
Description(s) found:
Found 37 descriptions.
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  • Type III polyketide synthase B OS=Arabidopsis thaliana GN=PKSB PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 392 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: phenylpropanoid biosynthetic process [ISS]
    pollen exine formation [IMP]
    Molecular Function: transferase activity, transferring acyl groups other than amino-acyl groups [IEA]
    catalytic activity [IEA]
    acyltransferase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSIDAAVLG SEKKSNPGKA TILALGKAFP HQLVMQEYLV DGYFKTTKCD DPELKQKLTR  60
   61 LCKTTTVKTR YVVMSEEILK KYPELAIEGG STVTQRLDIC NDAVTEMAVE ASRACIKNWG 120
  121 RSISDITHVV YVSSSEARLP GGDLYLAKGL GLSPDTHRVL LYFVGCSGGV AGLRVAKDIA 180
  181 ENNPGSRVLL ATSETTIIGF KPPSVDRPYD LVGVALFGDG AGAMIIGSDP DPICEKPLFE 240
  241 LHTAIQNFLP ETEKTIDGRL TEQGINFKLS RELPQIIEDN VENFCKKLIG KAGLAHKNYN 300
  301 QMFWAVHPGG PAILNRIEKR LNLSPEKLSP SRRALMDYGN ASSNSIVYVL EYMLEESKKV 360
  361 RNMNEEENEW GLILAFGPGV TFEGIIARNL DV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..392] PSI-BLAST 109.0 Chalcone synthase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  2.14505178497871 bayes_pls_golite062009
  • transferase activity
    		•  1.45483382098717 bayes_pls_golite062009
  • transferase activity, transferring acyl groups
    		•  1.12155569250025 bayes_pls_golite062009
  • transferase activity, transferring acyl groups other than amino-acyl groups
    		•  1.04684145062403 bayes_pls_golite062009
  • acyltransferase activity
    		•  0.932050235566705 bayes_pls_golite062009
  • naringenin-chalcone synthase activity
    		•  0.385839480590315 bayes_pls_golite062009
  • 3-oxoacyl-[acyl-carrier-protein] synthase activity
    		•  0.130687514570417 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle