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Protein Overview: gi|110735706, gi...

General Information:
Name(s) found: gi|21553938 [NCBI NR]
gi|18417177 [NCBI NR]
gi|110735706 [NCBI NR]
gi|107738381 [NCBI NR]
Description(s) found:
Found 13 descriptions.
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  • gi|21553938|gb|AAM63019.1| unknown [Arabidopsis thaliana] [NCBI NR]
  • gi|18417177|ref|NP_567805.1| ribosomal protein L22 family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|110735706|dbj|BAE99833.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • gi|107738381|gb|ABF83687.1| At4g28360 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 271 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDA]
    ribosome [ISS]
    Biological Process: translation [IEA][ISS]
    Molecular Function: structural constituent of ribosome [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGWKRNLQT VIRQVGRRVK NSHISTANYS SSTRNLESPF SQGYLQSLLR PSYSSRPLYH  60
   61 HLQQLGISTS RQLQASEEPV SSPLSSPALL GSGKEEEQKI IPKRQKVQAV LKSIKQSPKK 120
  121 VNLVAALVRG MRVEDALIQL QVTVKRAAQT VYRVIHAARA NATHNHGLDP DRLLVAEAFV 180
  181 GKGLFGKKVA YHAKGRSGII SIPRCRLTVI VRETTPEEEA EIARLKVHNF KKKSKRERQL 240
  241 VPHKLIETSP IWNRRGTKAN HRSSELVRSS H

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..89] deduced N/A No confident structure predictions are available.
    2 View Details [90..271] PSI-BLAST 34.39794 50S subunit

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • structural constituent of ribosome
    		•  9.71138472170121 bayes_pls_golite062009
  • structural molecule activity
    		•  9.13471776263155 bayes_pls_golite062009
  • binding
    		•  0.861343702064253 bayes_pls_golite062009
  • protein binding
    		•  0.15396157891606 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle