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Protein Overview: DDPS7_ARATH

General Information:
Name(s) found: DDPS7_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
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  • Dehydrodolichyl diphosphate synthase 7 OS=Arabidopsis thaliana GN=At5g60500 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 271 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: transferase activity, transferring alkyl or aryl (other than methyl) groups [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTLEEVDES THIFNALMSL MRKFLFRVLC VGPIPTNISF IMDGNRRFAK KHNLIGLDAG  60
   61 HRAGFISVKY ILQYCKEIGV PYVTLHAFGM DNFKRGPEEV KCVMDLMLEK VELAIDQAVS 120
  121 GNMNGVRIIF AGDLDSLNEH FRAATKKLME LTEENRDLIV VVCVAYSTSL EIVHAVRKSC 180
  181 VRKCTNGDDL VLLELSDVEE CMYTSIVPVP DLVIRTGGGD RLSNFMTWQT SRSLLHRTEA 240
  241 LWPELGLWHL VWAILKFQRM QDYLTKKKKL D

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..271] PSI-BLAST 92.221849 Undecaprenyl diphosphate synthase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • prenyltransferase activity
    		•  4.40397054534951 bayes_pls_golite062009
  • di-trans,poly-cis-decaprenylcistransferase activity
    		•  3.07573514495519 bayes_pls_golite062009
  • transferase activity
    		•  1.42376896518855 bayes_pls_golite062009
  • catalytic activity
    		•  0.878978773660153 bayes_pls_golite062009
  • dehydrodolichyl diphosphate synthase activity
    		•  0.761527128946352 bayes_pls_golite062009
  • binding
    		•  0.747530931796963 bayes_pls_golite062009
  • protein binding
    		•  0.331797220769091 bayes_pls_golite062009
  • transferase activity, transferring alkyl or aryl (other than methyl) groups
    		•  0.256467886977999 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.56

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle