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Protein Overview: RIBD_ARATH

General Information:
Name(s) found: RIBD_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
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  • Riboflavin biosynthesis protein PYRD, chloroplastic OS=Arabidopsis thaliana GN=PYRD PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 426 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    Biological Process: riboflavin biosynthetic process [IDA]
    Molecular Function: zinc ion binding [ISS]
    diaminohydroxyphosphoribosylaminopyrimidine deaminase activity [IGI]
    hydrolase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQISCLPISI PSITPRTSIP LLPSLSSNPR RIFNLTSLQS PNHCFFKRLH KSQTGFSNPV  60
   61 LAAMRREEDV EVDDSFYMRK CVELAKRAIG CTSPNPMVGC VIVKDGDIVG QGFHPKAGQP 120
  121 HAEVFALRDA GELAENATAY VSLEPCNHYG RTPPCTEALI KAKVRRVVIG MVDPNPIVFS 180
  181 SGISRLKDAG IDVTVSVEEE LCKKMNEGFI HRMLTGKPFL ALRYSMSVNG CLLDKIGQGA 240
  241 SDSGGYYSKL LQEYDAIILS SSLSDELSSI SSQEAINVSI QPIQIIVASN AQQSHILASS 300
  301 HTVEESGPKV VVFTAKESVA ESGISSSGVE TVVLEKINLD SILDYCYNRG LCSVLLDLRG 360
  361 NVKDLEVLLR DGFEQKLLQK VIIEVLPEWS TKDERQIASM KWLESKHVKD LQSKQLGGSV 420
  421 LLEGYF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..69] MSA 1.604988 View MSA. No confident structure predictions are available.
    2 View Details [70..426] PSI-BLAST 87.69897 No description for 2g6vA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle