YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: SEBP2_ARATH

General Information:
Name(s) found: SEBP2_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
SHOW ALL
  • Selenium-binding protein 2 OS=Arabidopsis thaliana GN=SBP2 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 487 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: polar nucleus fusion [IMP]
    Molecular Function: selenium binding [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATETVLATA VSNGKSKGCC KSGPGYATPL AAMAGPREKL IYVTALYSGT GRDKPDYLAT  60
   61 VDVDPSSPTF SSVIHRLKMP YIGDELHHTG WNSCSSCHGD ASADRRYLVL PGLISGRIYA 120
  121 IDTKTDPKAP SLYKVVEPKE IAEKTGLAFP HTSHCLASGD MLVSCLGDKE GNAKGNGFLL 180
  181 LDSDFNVKSR WDKPGHGPLF GYDFWYQPRF KTMISTSWGA PKAFSKGFNL QHVADGLYGS 240
  241 HLHIYQWPEG EMKQIIDLGN TGLLPLEIRF LHDPSKDTGY VGSALSSNMI RFFKNSDDTW 300
  301 SHEVVISVKP LKVENWILPE MPGLITDFLI SLDDRFFYFV NWLHGDIRQY NIEDPKNPVL 360
  361 TGQIWVGGLL QKGSPYKAVG EDGNTYQFDV PQIKGKSLRA GPQMIQLSLD GKRLYATNSL 420
  421 FSAWDRQFYP EIMEKGSHII QIDVDTDKGG LTLNPDFFVD FGDEPDGPAL AHEMRYPGGD 480
  481 CTSDIWI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..209] MSA 3.121924 View MSA. No confident structure predictions are available.
    2 View Details [210..487] PSI-BLAST 22.39794 Surface layer protein

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.565955069185473 bayes_pls_golite062009
  • protein binding
    		•  0.188092612225384 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle