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Protein Overview: ORP3C_ARATH

General Information:
Name(s) found: ORP3C_ARATH [Swiss-Prot]
Description(s) found:
Found 10 descriptions.
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  • Oxysterol-binding protein-related protein 3C OS=Arabidopsis thaliana GN=ORP3C PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 457 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: steroid metabolic process [IEA][ISS]
    Molecular Function: oxysterol binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSPKKNENK GFFAAMTSGF SMFGTAVSRS VNGVQGNEGV EVINPEGGKE DAEEEAQKGR  60
   61 WKDEERDSYW KMMQKYIGSD ITSMVTLPVV IFEPMTMLQK MAEIMEYSHL LDQADECEDP 120
  121 YLRLVYASSW AISVYYAFQR TWKPFNPILG ETYEMVNHGG ISFISEQVSH HPPMSAGHAE 180
  181 NEHFIYDITS KLKTKLLGNS VDVYPVGRTR VTLKKDGVVL DLVPPLTKIH NLIFGRTWVD 240
  241 SPGEMVMTNL TTGDKVVLYF QPCGWFGSGR YEVDGYVYSA AEEPKIMMTG KWNEKMSYQP 300
  301 CDAEGEPLPG TELKEVWHLA DVPKNDNFQY THFAHKINSF DTAPAKLLAS DSRIRPDRYS 360
  361 LEQGDLSKAG SEKHSLEERQ RAEKRTRETK GQKFTPRWFD LTDEITPTPW GDIEVYQYNG 420
  421 KYNEHRDTAE SSSSASNETD LKSIEFNPWQ YGNISTE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..457] PSI-BLAST 70.0 Structure of yeast oxysterol binding protein Osh4 in complex with 7-hydroxycholesterol

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • sterol binding
    		•  3.12877992228795 bayes_pls_golite062009
  • oxysterol binding
    		•  2.56824234952236 bayes_pls_golite062009
  • steroid binding
    		•  2.54679035876403 bayes_pls_golite062009
  • lipid binding
    		•  1.46539100663772 bayes_pls_golite062009
  • binding
    		•  0.958372296392311 bayes_pls_golite062009
    		• 0.35288515581255 bayes_pls_golite062009
  • phospholipid binding
    		•  0.0867097353003303 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle